RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 LYPLA2O95372 231 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 AVPR2P30518 371 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 AFF1P51825 1210 aaKnown RBP15.2■□□□□ 0.02
CNOT1-215ENST00000569020 PTENP60484 403 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 POU5F1BQ06416 359 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 TRIM29Q14134 588 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 ME3Q16798 604 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 NECAB1Q8N987 351 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 SMG8Q8ND04 991 aaKnown RBP15.2■□□□□ 0.02
CNOT1-215ENST00000569020 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 CCDC51Q96ER9 411 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 KLHL5Q96PQ7 755 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 VN1R3Q9BXE9 311 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 TTC12Q9H892 705 aaPredicted RBP15.2■□□□□ 0.02
CNOT1-215ENST00000569020 XPNPEP1Q9NQW7 623 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 ANKEF1Q9NU02 776 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 SSX2IPQ9Y2D8 614 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 MTCL1Q9Y4B5 1905 aaKnown RBP15.19■□□□□ 0.02
CNOT1-215ENST00000569020 NEMFO60524 1076 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 NR1I2O75469 434 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 SOD2P04179 222 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 URODP06132 367 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 TXKP42681 527 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 OR1G1P47890 313 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 CLCN4P51793 760 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 VCPP55072 806 aaKnown RBP15.19■□□□□ 0.02
CNOT1-215ENST00000569020 TMC5Q6UXY8 1006 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 IFNLR1Q8IU57 520 aaPredicted RBP15.19■□□□□ 0.02
CNOT1-215ENST00000569020 HACE1Q8IYU2 909 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 ZDHHC14Q8IZN3 488 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 CPB2Q96IY4 423 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 HSD17B14Q9BPX1 270 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 EIF2AQ9BY44 585 aaKnown RBP15.19■□□□□ 0.02
CNOT1-215ENST00000569020 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
CNOT1-215ENST00000569020 CSRNP2Q9H175 543 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 IRF2BPLQ9H1B7 796 aa15.19■□□□□ 0.02
CNOT1-215ENST00000569020 ARL5CA6NH57 179 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 BTBD18B2RXH4 712 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 EIF5BO60841 1220 aaKnown RBP15.18■□□□□ 0.02
CNOT1-215ENST00000569020 LARGE1O95461 756 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 BRD1O95696 1058 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
CNOT1-215ENST00000569020 MLH1P40692 756 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 TCF15Q12870 199 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 CAPSQ13938 189 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 CCDC149Q6ZUS6 474 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 GPR149Q86SP6 731 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 DIS3L2Q8IYB7 885 aaKnown RBP15.18■□□□□ 0.02
CNOT1-215ENST00000569020 COLGALT2Q8IYK4 626 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 NSUN7Q8NE18 718 aaKnown RBP15.18■□□□□ 0.02
CNOT1-215ENST00000569020 ACSF2Q96CM8 615 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-215ENST00000569020 GAD1Q99259 594 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 HERC2P3Q9BVR0 1158 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 NFKBIZQ9BYH8 718 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 DPP7Q9UHL4 492 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 PRG3Q9Y2Y8 225 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-215ENST00000569020 HES2Q9Y543 173 aa15.18■□□□□ 0.02
CNOT1-215ENST00000569020 C2CD2LO14523 706 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 INPPL1O15357 1258 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 LILRB3O75022 631 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 PDGFBP01127 241 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-215ENST00000569020 ADH1AP07327 375 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 XRCC6P12956 609 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNOT1-215ENST00000569020 ARF4P18085 180 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-215ENST00000569020 ARL2P36404 184 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 RARRES1P49788 294 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 NUBP1P53384 320 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 FOSBP53539 338 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 MBTD1Q05BQ5 628 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 ELMSAN1Q6PJG2 1045 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 C15orf39Q6ZRI6 1047 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 ASAP3Q8TDY4 903 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 PHOX2BQ99453 314 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 APOL6Q9BWW8 343 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 MARCH5Q9NX47 278 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 LIMD1Q9UGP4 676 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 GIT1Q9Y2X7 761 aa15.17■□□□□ 0.02
CNOT1-215ENST00000569020 TRIOO75962 3097 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 ASGR2P07307 311 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 GLRA2P23416 452 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 GLUD2P49448 558 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 SCNN1GP51170 649 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 NEK4P51957 841 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 DSC1Q08554 894 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 SLC27A1Q6PCB7 646 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 OTOP3Q7RTS5 596 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 MTMR9Q96QG7 549 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 RPS6KC1Q96S38 1066 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 COLEC11Q9BWP8 271 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 POLR3FQ9H1D9 316 aaPredicted RBP15.16■□□□□ 0.02
CNOT1-215ENST00000569020 MIOSQ9NXC5 875 aa15.16■□□□□ 0.02
CNOT1-215ENST00000569020 POTEMA6NI47 508 aa15.15■□□□□ 0.02
CNOT1-215ENST00000569020 JAK2O60674 1132 aa15.15■□□□□ 0.02
CNOT1-215ENST00000569020 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
CNOT1-215ENST00000569020 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNOT1-215ENST00000569020 AMHR2Q16671 573 aa15.15■□□□□ 0.02
CNOT1-215ENST00000569020 RNF168Q8IYW5 571 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms