RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 GAS2O43903 313 aaKnown RBP13.97□□□□□ -0.17
SNX29-207ENST00000568949 GLULP15104 373 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
SNX29-207ENST00000568949 RSPO4Q2I0M5 234 aaPredicted RBP13.97□□□□□ -0.17
SNX29-207ENST00000568949 Q4G0T1 1027 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 UBXN11Q5T124 520 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 ANO5Q75V66 913 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 MAML2Q8IZL2 1156 aaPredicted RBP13.97□□□□□ -0.17
SNX29-207ENST00000568949 PHKBQ93100 1093 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 FOXQ1Q9C009 403 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNX29-207ENST00000568949 CHST7Q9NS84 486 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 FBXO4Q9UKT5 387 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 PRG3Q9Y2Y8 225 aaPredicted RBP13.97□□□□□ -0.17
SNX29-207ENST00000568949 COL4A3BPQ9Y5P4 624 aa13.97□□□□□ -0.17
SNX29-207ENST00000568949 POTEMA6NI47 508 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 SPTLC1O15269 473 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 ITGA4P13612 1032 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 OR1G1P47890 313 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 PSMC5P62195 406 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 AKAP17AQ02040 695 aaKnown RBP13.96□□□□□ -0.17
SNX29-207ENST00000568949 DSC1Q08554 894 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
SNX29-207ENST00000568949 LILRA6Q6PI73 481 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 GET4Q7L5D6 327 aaPredicted RBP13.96□□□□□ -0.17
SNX29-207ENST00000568949 EXOC8Q8IYI6 725 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 GJA10Q969M2 543 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 CNTNAP3BQ96NU0 1288 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 CNTNAP3Q9BZ76 1288 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 FNIP2Q9P278 1114 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 NAP1L2Q9ULW6 460 aaPredicted RBP13.96□□□□□ -0.17
SNX29-207ENST00000568949 PPME1Q9Y570 386 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 NUMBLQ9Y6R0 609 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 DOCK6Q96HP0 2047 aa13.96□□□□□ -0.17
SNX29-207ENST00000568949 NID2Q14112 1375 aa13.96□□□□□ -0.18
SNX29-207ENST00000568949 CYP3A7-CYP3A51PA0A087WV96 503 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 TGM5O43548 720 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 NR1I2O75469 434 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
SNX29-207ENST00000568949 SPATA31D3P0C874 917 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 MYBP10242 640 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 CYP3A7P24462 503 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 GPC5P78333 572 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 KRT32Q14532 448 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 ADCK5Q3MIX3 580 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 SPATA31D4Q6ZUB0 917 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 PALB2Q86YC2 1186 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
SNX29-207ENST00000568949 PSPC1Q8WXF1 523 aaKnown RBP13.95□□□□□ -0.18
SNX29-207ENST00000568949 SLC7A3Q8WY07 619 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 DDX23Q9BUQ8 820 aaKnown RBP13.95□□□□□ -0.18
SNX29-207ENST00000568949 COLEC11Q9BWP8 271 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 BCO2Q9BYV7 579 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 C22orf23Q9BZE7 217 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 OSBPL6Q9BZF3 934 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 PCDHGA2Q9Y5H1 932 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 TDRD15B5MCY1 1934 aaKnown RBP13.95□□□□□ -0.18
SNX29-207ENST00000568949 MYH15Q9Y2K3 1946 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 KMT2BQ9UMN6 2715 aaPredicted RBP13.95□□□□□ -0.18
SNX29-207ENST00000568949 DNAH14Q0VDD8 3507 aa13.95□□□□□ -0.18
SNX29-207ENST00000568949 KANSL1LA0AUZ9 987 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 LAMTOR5O43504 91 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 DKC1O60832 514 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNX29-207ENST00000568949 LRRN2O75325 713 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 ZMYND10O75800 440 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 KRT37O76014 449 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 FSHRP23945 695 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 AXLP30530 894 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 MAGEA9P43362 315 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 CREMQ03060 361 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 PRKCQQ04759 706 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNX29-207ENST00000568949 PLA2G4FQ68DD2 849 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 SECISBP2LQ93073 1101 aaKnown RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 MBOAT7Q96N66 472 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 GAD1Q99259 594 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 RNF26Q9BY78 433 aaPredicted RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 SH3GLB2Q9NR46 395 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 SPATA6Q9NWH7 488 aaPredicted RBP13.94□□□□□ -0.18
SNX29-207ENST00000568949 IPPQ9Y573 584 aa13.94□□□□□ -0.18
SNX29-207ENST00000568949 PATJQ8NI35 1801 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 ARL5CA6NH57 179 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 PRR5-ARHGAP8B1AHC4 643 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 ASAP2O43150 1006 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 ERLIN2O94905 339 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 SRGAP2CP0DJJ0 459 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 RFC5P40937 340 aa13.93□□□□□ -0.18
SNX29-207ENST00000568949 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
SNX29-207ENST00000568949 ATXN1P54253 815 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms