RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 RNF26Q9BY78 433 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 SLC2A4RGQ9NR83 387 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 CYP3A7-CYP3A51PA0A087WV96 503 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 ANHXE9PGG2 379 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 NR1I2O75469 434 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 TDP2O95551 362 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 EFEMP2O95967 443 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 ITGA4P13612 1032 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 CYP3A7P24462 503 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 HTR4Q13639 388 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 EXOC8Q8IYI6 725 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 SHDQ96IW2 340 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 PPME1Q9Y570 386 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 C2orf16Q68DN1 1984 aa13.2□□□□□ -0.3
GTF3C1-209ENST00000568569 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 TGM5O43548 720 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 ERLIN2O94905 339 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 MLH1P40692 756 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 NLRP5P59047 1200 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 STARD6P59095 220 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 DSC1Q08554 894 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 NTRK3Q16288 839 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 Q6ZUG5 572 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 GPR65Q8IYL9 337 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 DCLK2Q8N568 766 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 ETNPPLQ8TBG4 499 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 BRF1Q92994 677 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 GAD1Q99259 594 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 FOXQ1Q9C009 403 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 IPPQ9Y573 584 aa13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 ZFP37Q9Y6Q3 630 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-209ENST00000568569 SPTBN2O15020 2390 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 GLULP15104 373 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 RFC5P40937 340 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 NPEPPSP55786 919 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 CREMQ03060 361 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 PCBP1Q15365 356 aaKnown RBP eCLIP13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 MOXD1Q6UVY6 613 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 TMEM143Q96AN5 459 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 CEP170P1Q96L14 293 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 COLEC11Q9BWP8 271 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 DHX33Q9H6R0 707 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 FNIP2Q9P278 1114 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 PCDHA4Q9UN74 947 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 ACACBO00763 2458 aa13.18□□□□□ -0.3
GTF3C1-209ENST00000568569 POTEMA6NI47 508 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 F8W810 466 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 SPTLC1O15269 473 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 CPA1P15085 419 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 IFNAR1P17181 557 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 SDHBP21912 280 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 FSHRP23945 695 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 AXLP30530 894 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 SCNN1GP51170 649 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 BMP2KLQ5H9B9 411 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 FUT10Q6P4F1 479 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 HACE1Q8IYU2 909 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 ZFP42Q96MM3 310 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 EIF2AQ9BY44 585 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 NCDNQ9UBB6 729 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 FBXO4Q9UKT5 387 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
GTF3C1-209ENST00000568569 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms