RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 MAN1C1Q9NR34 630 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 MRPL17Q9NRX2 175 aaKnown RBP17.31■□□□□ 0.36
NME3-211ENST00000568561 USTQ9Y2C2 406 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 IPPQ9Y573 584 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 DOCK8Q8NF50 2099 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 FAM186AA6NE01 2351 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 TBX3O15119 743 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
NME3-211ENST00000568561 LILRB3O75022 631 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 CTDNEP1O95476 244 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 SOD2P04179 222 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 ALDH2P05091 517 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 URODP06132 367 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 SCNN1GP51170 649 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 FOSBP53539 338 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 FLCNQ8NFG4 579 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 ASAP3Q8TDY4 903 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 TCP11Q8WWU5 503 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 B3GALT6Q96L58 329 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 HERC2P3Q9BVR0 1158 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 ZSWIM4Q9H7M6 989 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 VPS13AQ96RL7 3174 aa17.3■□□□□ 0.36
NME3-211ENST00000568561 A0A087WWV3 80 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 ARL5CA6NH57 179 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 INO80B-WBP1J3KQ70 363 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 TEX28O15482 410 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 ST18O60284 1047 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 PFKFB2O60825 505 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 XBP1P17861 261 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 CWF19L1Q69YN2 538 aaKnown RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 ASTLQ6HA08 431 aaPredicted RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 CDR2LQ86X02 465 aaPredicted RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 EXOC8Q8IYI6 725 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 COLGALT2Q8IYK4 626 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 ACSF2Q96CM8 615 aaPredicted RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 NXF3Q9H4D5 531 aaKnown RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 MIOSQ9NXC5 875 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 MTCL1Q9Y4B5 1905 aaKnown RBP17.29■□□□□ 0.36
NME3-211ENST00000568561 WDR87Q6ZQQ6 2873 aa17.29■□□□□ 0.36
NME3-211ENST00000568561 WNT7AO00755 349 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 ASAP2O43150 1006 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 B4GALT5O43286 388 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 GAS2O43903 313 aaKnown RBP17.28■□□□□ 0.36
NME3-211ENST00000568561 N4BP1O75113 896 aaKnown RBP17.28■□□□□ 0.36
NME3-211ENST00000568561 SLITRK3O94933 977 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 SPATA31D3P0C874 917 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 GLUD2P49448 558 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 PTENP60484 403 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 MBTD1Q05BQ5 628 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 CAPSQ13938 189 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 NOTUMQ6P988 496 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 SPATA31D4Q6ZUB0 917 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 OTOP3Q7RTS5 596 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 RABGGTAQ92696 567 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 NAP1L4Q99733 375 aaKnown RBP17.28■□□□□ 0.36
NME3-211ENST00000568561 EIF2AK1Q9BQI3 630 aaKnown RBP17.28■□□□□ 0.36
NME3-211ENST00000568561 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
NME3-211ENST00000568561 GVINP1Q7Z2Y8 2422 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 NARSO43776 548 aaKnown RBP17.27■□□□□ 0.36
NME3-211ENST00000568561 RFPL2O75678 378 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 BAG4O95429 457 aaKnown RBP17.27■□□□□ 0.36
NME3-211ENST00000568561 LARGE1O95461 756 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
NME3-211ENST00000568561 AKAP5P24588 427 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 KRT2P35908 639 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 DSC1Q08554 894 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 AMHR2Q16671 573 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 ASCL5Q7RTU5 278 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 GLYCTKQ8IVS8 523 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 SLFN12Q8IYM2 578 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 CNNM3Q8NE01 707 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 CSRNP2Q9H175 543 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 KCNK12Q9HB15 430 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
NME3-211ENST00000568561 INPPL1O15357 1258 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 GLUD1P00367 558 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 ADH1AP07327 375 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 ARF4P18085 180 aaPredicted RBP17.26■□□□□ 0.35
NME3-211ENST00000568561 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
NME3-211ENST00000568561 NUBP1P53384 320 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 TDGQ13569 410 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 TFDP1Q14186 410 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 MXD4Q14582 209 aaPredicted RBP17.26■□□□□ 0.35
NME3-211ENST00000568561 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 C15orf39Q6ZRI6 1047 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 RNF168Q8IYW5 571 aaPredicted RBP17.26■□□□□ 0.35
NME3-211ENST00000568561 RSAD2Q8WXG1 361 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
NME3-211ENST00000568561 TRIM6Q9C030 488 aaPredicted RBP17.26■□□□□ 0.35
NME3-211ENST00000568561 POLR3FQ9H1D9 316 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms