RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 GLB1LQ6UWU2 654 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 MAEAQ7L5Y9 396 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 TAS1R3Q7RTX0 852 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 CABP7Q86V35 215 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 ZBTB8OSQ8IWT0 167 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 RNF168Q8IYW5 571 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 CPB2Q96IY4 423 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 IFT74Q96LB3 600 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 DRC1Q96MC2 740 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 ZNF558Q96NG5 402 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 USP28Q96RU2 1077 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 CDCA3Q99618 268 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 TMEM175Q9BSA9 504 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 RNF39Q9H2S5 420 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 UBE2ZQ9H832 354 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 RSAD1Q9HA92 442 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 MIOSQ9NXC5 875 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 SPG21Q9NZD8 308 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 TNFSF13BQ9Y275 285 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 IRAK3Q9Y616 596 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 MYO10Q9HD67 2058 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 FSD2A1L4K1 749 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ARL5CA6NH57 179 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 K7ERI5 159 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ABLIM1O14639 778 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 N4BP3O15049 544 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 B4GALT3O60512 393 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 LILRB3O75022 631 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 DDHD2O94830 711 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 BRD1O95696 1058 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ITGA4P13612 1032 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 SCP2P22307 547 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 UBA7P41226 1012 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ALDH7A1P49419 539 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 TFF2Q03403 129 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 DUSP6Q16828 381 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 XKR4Q5GH76 650 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ATL3Q6DD88 541 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 FAM173BQ6P4H8 233 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ALKAL1Q6UXT8 129 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 DDX53Q86TM3 631 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ZNF280BQ86YH2 543 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 COLGALT2Q8IYK4 626 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 EFHBQ8N7U6 833 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 LINC00301Q8NCQ3 95 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 IGSF21Q96ID5 467 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 MSLNLQ96KJ4 702 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ACO2Q99798 780 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 PDZD7Q9H5P4 517 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 NGRNQ9NPE2 291 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 STK39Q9UEW8 545 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 ODF2LQ9ULJ1 636 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 CUL9Q8IWT3 2517 aa9.03□□□□□ -0.96
HDGFL3-205ENST00000568129 C5orf42Q9H799 3197 aa9.02□□□□□ -0.96
HDGFL3-205ENST00000568129 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 DLL1O00548 723 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PPP6R2O75170 966 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 ALDH2P05091 517 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PRKCBP05771 671 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PLS3P13797 630 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PLCG1P19174 1290 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 SLC11A1P49279 550 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 NCKAP1LP55160 1127 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PEX3P56589 373 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 KRT17Q04695 432 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 DMP1Q13316 513 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PRPF4BQ13523 1007 aaKnown RBP9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 GIT2Q14161 759 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 NAB2Q15742 525 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 SPOUT1Q5T280 376 aaKnown RBP9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 ADGRD2Q7Z7M1 963 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 TMEM173Q86WV6 379 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 HSCBQ8IWL3 235 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 GPR65Q8IYL9 337 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 THNSL1Q8IYQ7 743 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 MRPL43Q8N983 215 aaKnown RBP9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 TMEM161BQ8NDZ6 487 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 DEPTORQ8TB45 409 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 URGCPQ8TCY9 931 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 RAD54LQ92698 747 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 CALML4Q96GE6 196 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 EPSTI1Q96J88 318 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 FIZ1Q96SL8 496 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 GAD1Q99259 594 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 ST6GALNAC4Q9H4F1 302 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 POLD4Q9HCU8 107 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 DNAJB4Q9UDY4 337 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PUF60Q9UHX1 559 aaKnown RBP9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 HES2Q9Y543 173 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 PLXNA3P51805 1871 aa9.02□□□□□ -0.97
HDGFL3-205ENST00000568129 C2orf71A6NGG8 1288 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 NRP1O14786 923 aa9.01□□□□□ -0.97
HDGFL3-205ENST00000568129 PAPLNO95428 1278 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms