RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 TRIM9Q9C026 710 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 BLZF1Q9H2G9 400 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 PARP2Q9UGN5 583 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 MTUS1Q9ULD2 1270 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 HPSEQ9Y251 543 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 INPP5FQ9Y2H2 1132 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 IPPQ9Y573 584 aa16.65■□□□□ 0.26
COMMD4-219ENST00000567399 LINC01553A4QN01 128 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 ZNF623O75123 536 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 LIG4P49917 911 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 TAP1Q03518 808 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 UBXN11Q5T124 520 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 NT5DC1Q5TFE4 455 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 STXBP4Q6ZWJ1 553 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 Q7L0L9 218 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 ZBTB33Q86T24 672 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 GRAMD1CQ8IYS0 662 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 CMTR2Q8IYT2 770 aaKnown RBP16.64■□□□□ 0.25
COMMD4-219ENST00000567399 URGCPQ8TCY9 931 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 ARNTL2Q8WYA1 636 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 CCDC47Q96A33 483 aaKnown RBP16.64■□□□□ 0.25
COMMD4-219ENST00000567399 ZNF689Q96CS4 500 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-219ENST00000567399 TGS1Q96RS0 853 aaKnown RBP16.64■□□□□ 0.25
COMMD4-219ENST00000567399 ACO2Q99798 780 aaKnown RBP16.64■□□□□ 0.25
COMMD4-219ENST00000567399 TMEM117Q9H0C3 514 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 GOLPH3LQ9H4A5 285 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 PDZD7Q9H5P4 517 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 TBX20Q9UMR3 447 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 PCDHB13Q9Y5F0 798 aa16.64■□□□□ 0.25
COMMD4-219ENST00000567399 FAM237AA0A1B0GTK4 181 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
COMMD4-219ENST00000567399 HARSP12081 509 aaKnown RBP16.63■□□□□ 0.25
COMMD4-219ENST00000567399 RNASELQ05823 741 aaKnown RBP16.63■□□□□ 0.25
COMMD4-219ENST00000567399 COASYQ13057 564 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 CUL4BQ13620 913 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 DCAF4L1Q3SXM0 396 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 ZNF568Q3ZCX4 644 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 MRPL10Q7Z7H8 261 aaKnown RBP16.63■□□□□ 0.25
COMMD4-219ENST00000567399 ZNF598Q86UK7 904 aaKnown RBP16.63■□□□□ 0.25
COMMD4-219ENST00000567399 SYCP3Q8IZU3 236 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 RSAD1Q9HA92 442 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 AAASQ9NRG9 546 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 EXOC7Q9UPT5 735 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 TNFSF13BQ9Y275 285 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 RWDD3Q9Y3V2 267 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 HES2Q9Y543 173 aa16.63■□□□□ 0.25
COMMD4-219ENST00000567399 TCHHQ07283 1943 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 CASP1P29466 404 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 EEF1DP3Q658K8 133 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 KRBA2Q6ZNG9 492 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 ZNF720Q7Z2F6 126 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 CRIPAKQ8N1N5 446 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 SMG8Q8ND04 991 aaKnown RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 SAMD11Q96NU1 681 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 CASD1Q96PB1 797 aa16.62■□□□□ 0.25
COMMD4-219ENST00000567399 FAM193BQ96PV7 902 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 MRPL9Q9BYD2 267 aaKnown RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 HOOK1Q9UJC3 728 aaKnown RBP16.62■□□□□ 0.25
COMMD4-219ENST00000567399 CLDN3O15551 220 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 TOM1L1O75674 476 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 EDN1P05305 212 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 MYL1P05976 194 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 ATF7P17544 494 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 AKAP5P24588 427 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 CTNNB1P35222 781 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 YARSP54577 528 aaKnown RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 GTF2BQ00403 316 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 ALCAMQ13740 583 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 NOMO2Q5JPE7 1267 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 CLLU1OSQ5K130 101 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 ZPBP2Q6X784 338 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 TMEM192Q8IY95 271 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 FBXO22Q8NEZ5 403 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 RSPH1Q8WYR4 309 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 ACCSQ96QU6 501 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 RPS6KC1Q96S38 1066 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 GAS2L1Q99501 681 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 C17orf80Q9BSJ5 609 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 OLFML3Q9NRN5 406 aa16.61■□□□□ 0.25
COMMD4-219ENST00000567399 TYW1Q9NV66 732 aaKnown RBP16.61■□□□□ 0.25
COMMD4-219ENST00000567399 EXOC1Q9NV70 894 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms