RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 TMEM117Q9H0C3 514 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 GOLPH3LQ9H4A5 285 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 MAGEF1Q9HAY2 307 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 FAM13BQ9NYF5 915 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 IPPQ9Y573 584 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 XIRP2A4UGR9 3374 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 LPXNO60711 386 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 FAM13AO94988 1023 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 SLFN14P0C7P3 912 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 SCP2P22307 547 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 NDUFA8P51970 172 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 GTF2BQ00403 316 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 EHHADHQ08426 723 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 PRPF4BQ13523 1007 aaKnown RBP13.66□□□□□ -0.22
RNF40-211ENST00000567365 SLC27A1Q6PCB7 646 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 LRRC55Q6ZSA7 311 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 CNNM3Q8NE01 707 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 STAMQ92783 540 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 LPPQ93052 612 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
RNF40-211ENST00000567365 C7orf25Q9BPX7 421 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 PYM1Q9BRP8 204 aaKnown RBP13.66□□□□□ -0.22
RNF40-211ENST00000567365 C17orf80Q9BSJ5 609 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 CWH43Q9H720 699 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 OLFML3Q9NRN5 406 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 SEL1LQ9UBV2 794 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 LRFN2Q9ULH4 789 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 MRPL42Q9Y6G3 142 aaKnown RBP13.66□□□□□ -0.22
RNF40-211ENST00000567365 ZMYM2Q9UBW7 1377 aa13.66□□□□□ -0.22
RNF40-211ENST00000567365 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 N4BP3O15049 544 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 HOXA2O43364 376 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 TRAK2O60296 914 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 OFD1O75665 1012 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 PIGRP01833 764 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 GAP43P17677 238 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 POU3F3P20264 500 aaPredicted RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 SMTNP53814 917 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 BTG3Q14201 252 aaPredicted RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 ATF7IP2Q5U623 682 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 ZPBP2Q6X784 338 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 ZNF720Q7Z2F6 126 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 SFR1Q86XK3 245 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 FIBCD1Q8N539 461 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 SAMD11Q96NU1 681 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 TARS2Q9BW92 718 aaKnown RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 MRPL4Q9BYD3 311 aaKnown RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 NXF3Q9H4D5 531 aaKnown RBP13.65□□□□□ -0.22
RNF40-211ENST00000567365 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 SERTAD1Q9UHV2 236 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 TNFSF13BQ9Y275 285 aa13.65□□□□□ -0.22
RNF40-211ENST00000567365 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 H0YCG3 227 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 B4GALT3O60512 393 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 TBCAO75347 108 aaKnown RBP13.64□□□□□ -0.23
RNF40-211ENST00000567365 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
RNF40-211ENST00000567365 BMPR1AP36894 532 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 AFF1P51825 1210 aaKnown RBP13.64□□□□□ -0.23
RNF40-211ENST00000567365 PAN2Q504Q3 1202 aaKnown RBP13.64□□□□□ -0.23
RNF40-211ENST00000567365 EPC2Q52LR7 807 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 MAP4K3Q8IVH8 894 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 HELQQ8TDG4 1101 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 PAGE5Q96GU1 130 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 FGFBP2Q9BYJ0 223 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 HAPLN2Q9GZV7 340 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 CDT1Q9H211 546 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 PRDM12Q9H4Q4 367 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 TBX20Q9UMR3 447 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 HES2Q9Y543 173 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 PRRC2BQ5JSZ5 2229 aaKnown RBP13.64□□□□□ -0.23
RNF40-211ENST00000567365 ATG2AQ2TAZ0 1938 aa13.64□□□□□ -0.23
RNF40-211ENST00000567365 RFXAPO00287 272 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 NPTXRO95502 500 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 RB1P06400 928 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 IBSPP21815 317 aaPredicted RBP13.63□□□□□ -0.23
RNF40-211ENST00000567365 CASP1P29466 404 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 SYKP43405 635 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 CASP5P51878 434 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 AMPD3Q01432 767 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
RNF40-211ENST00000567365 CUL4BQ13620 913 aa13.63□□□□□ -0.23
RNF40-211ENST00000567365 SLC39A4Q6P5W5 647 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms