RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 STAMQ92783 540 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 GPBP1L1Q9HC44 474 aaPredicted RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 STRIP2Q9ULQ0 834 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 NDUFB9Q9Y6M9 179 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 ATXN2Q99700 1313 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 C19orf81C9J6K1 198 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 ZNF609O15014 1411 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 RALAP11233 206 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 AP1B1Q10567 949 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 LBRQ14739 615 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 BEST2Q8NFU1 509 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 TRIM4Q9C037 500 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 PUS7LQ9H0K6 701 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 SMARCAD1Q9H4L7 1026 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 ADARB2Q9NS39 739 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 FAF1Q9UNN5 650 aaPredicted RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 NFE2L3Q9Y4A8 694 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 LRRC53A6NM62 1247 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 DDIT3P35638 169 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 POLR2FP61218 127 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 MTBPQ96DY7 904 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 PAWRQ96IZ0 340 aaKnown RBP6.62□□□□□ -1.35
CDH13-209ENST00000567109 EGFL8Q99944 293 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 NDEL1Q9GZM8 345 aa6.62□□□□□ -1.35
CDH13-209ENST00000567109 SIGLEC1Q9BZZ2 1709 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 FCER1AP12319 257 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 VEGFAP15692 232 aaPredicted RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 TCF3P15923 654 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 TRIM62Q9BVG3 475 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 WDR11Q9BZH6 1224 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 TOPORSQ9NS56 1045 aaPredicted RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SUN2Q9UH99 717 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 FBXL5Q9UKA1 691 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 L3MBTL1Q9Y468 752 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 KNDC1Q76NI1 1749 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 GDF11O95390 407 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 FGAP02671 866 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 GOLGA8HP0CJ92 632 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SCG2P13521 617 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 GAP43P17677 238 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 NCALDP61601 193 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 ADAM9Q13443 819 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 TTLL4Q14679 1199 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 PKN3Q6P5Z2 889 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 ADCK2Q7Z695 626 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 GPKOWQ92917 476 aaPredicted RBP eCLIP6.61□□□□□ -1.35
CDH13-209ENST00000567109 NAF1Q96HR8 494 aaKnown RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 KLHL8Q9P2G9 620 aaPredicted RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 SEL1LQ9UBV2 794 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 CNOT7Q9UIV1 285 aaKnown RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 PRR23AA6NEV1 266 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 RASGRF2O14827 1237 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 BMP3P12645 472 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 GUCA1AP43080 201 aaPredicted RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 CLCN6P51797 869 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 ATXN3P54252 364 aaPredicted RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 SYTL3Q4VX76 610 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 USP17L2Q6R6M4 530 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 C3orf67Q6ZVT6 689 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 RASEFQ8IZ41 740 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SCYL3Q8IZE3 742 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 CASS4Q9NQ75 786 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 ZMYM6O95789 1325 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 COBLO75128 1261 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 KRT1P04264 644 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 CYP21A2P08686 494 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SLC9A1P19634 815 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 PHKA2P46019 1235 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 CCDC15Q0P6D6 951 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 IDI2Q9BXS1 227 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 UPF3AQ9H1J1 476 aaKnown RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 TMEM206Q9H813 350 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 RPRD1BQ9NQG5 326 aaKnown RBP6.61□□□□□ -1.35
CDH13-209ENST00000567109 MEIS1O00470 390 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 CFLARO15519 480 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 DAB2P98082 770 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 TMED1Q13445 227 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 OR6B2Q6IFH4 312 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 TTC8Q8TAM2 541 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 PBKQ96KB5 322 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SERPINI1Q99574 410 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 KIFC3Q9BVG8 833 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 MFSD1Q9H3U5 465 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 HOXC10Q9NYD6 342 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 CAPN11Q9UMQ6 739 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SPDYE5A6NIY4 337 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 ZBED1O96006 694 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 LIG3P49916 1009 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 PDCLQ13371 301 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 MED21Q13503 144 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SPDYE7PQ495Y7 208 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 SGO2Q562F6 1265 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 KRT40Q6A162 431 aa6.61□□□□□ -1.35
CDH13-209ENST00000567109 THOC1Q96FV9 657 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms