RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 IQCF3P0C7M6 154 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 KRT13P13646 458 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 PHKA2P46019 1235 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 GPC3P51654 580 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 ADAM17P78536 824 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 TMEM62Q0P6H9 643 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 INTS8Q75QN2 995 aaKnown RBP19.28■□□□□ 0.68
HERC2-208ENST00000566635 GPD1LQ8N335 351 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 FBXL18Q96ME1 805 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 FAM213AQ9BRX8 229 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 LSM14BQ9BX40 385 aaKnown RBP19.28■□□□□ 0.68
HERC2-208ENST00000566635 MRPL4Q9BYD3 311 aaKnown RBP19.28■□□□□ 0.68
HERC2-208ENST00000566635 PTCH2Q9Y6C5 1203 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 MAPK13O15264 365 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 TREHO43280 583 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 CYP2C9P11712 490 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 HARSP12081 509 aaKnown RBP19.28■□□□□ 0.68
HERC2-208ENST00000566635 MATR3P43243 847 aaKnown RBP eCLIP19.28■□□□□ 0.68
HERC2-208ENST00000566635 NKX3-2P78367 333 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 CBWD6Q4V339 395 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 CBWD3Q5JTY5 395 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 CBWD5Q5RIA9 395 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 C1orf220Q5T0J3 134 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 CNGA4Q8IV77 575 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 NLRP7Q8WX94 980 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 NFKBIZQ9BYH8 718 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 FZD8Q9H461 694 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 AGPAT5Q9NUQ2 364 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 DDX20Q9UHI6 824 aaKnown RBP19.28■□□□□ 0.68
HERC2-208ENST00000566635 TRIM17Q9Y577 477 aa19.28■□□□□ 0.68
HERC2-208ENST00000566635 FRMPD3Q5JV73 1810 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 KPNA6O60684 536 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 VAMP7P51809 220 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 NLRP11P59045 1033 aaKnown RBP19.27■□□□□ 0.68
HERC2-208ENST00000566635 ZBTB41Q5SVQ8 909 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 C7orf31Q8N865 590 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 SLAIN1Q8ND83 568 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 ACO2Q99798 780 aaKnown RBP19.27■□□□□ 0.68
HERC2-208ENST00000566635 MSTO1Q9BUK6 570 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 TMX1Q9H3N1 280 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 ABHD10Q9NUJ1 306 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 AGO2Q9UKV8 859 aaKnown RBP19.27■□□□□ 0.68
HERC2-208ENST00000566635 CAPN11Q9UMQ6 739 aa19.27■□□□□ 0.68
HERC2-208ENST00000566635 C17orf102A2RUQ5 167 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 RBAK-RBAKDNI3L0D1 243 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 TULP1O00294 542 aaPredicted RBP19.27■□□□□ 0.67
HERC2-208ENST00000566635 HOXC8P31273 242 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 KRT9P35527 623 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 FMO5P49326 533 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 KIZQ2M2Z5 673 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 ZPBP2Q6X784 338 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 KLHDC9Q8NEP7 349 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 NUP58Q9BVL2 599 aa19.27■□□□□ 0.67
HERC2-208ENST00000566635 A0A0B4J269 797 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 SMIM35A0A1B0GVV1 85 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 ACKR2O00590 384 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 HSPA6P17066 643 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 PRPF4BQ13523 1007 aaKnown RBP19.26■□□□□ 0.67
HERC2-208ENST00000566635 ARHGEF6Q15052 776 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 KCNA10Q16322 511 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 FIGNQ5HY92 759 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 ZBTB33Q86T24 672 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 CDR2LQ86X02 465 aaPredicted RBP19.26■□□□□ 0.67
HERC2-208ENST00000566635 IFNLR1Q8IU57 520 aaPredicted RBP19.26■□□□□ 0.67
HERC2-208ENST00000566635 PANX2Q96RD6 677 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 GCNT4Q9P109 453 aa19.26■□□□□ 0.67
HERC2-208ENST00000566635 ABLIM1O14639 778 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 EXTL3O43909 919 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 ZEB2O60315 1214 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 NOL4O94818 638 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 ASGR1P07306 291 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 ACTN1P12814 892 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 SLC9A1P19634 815 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 ACOT2P49753 483 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 MAP2K1Q02750 393 aaPredicted RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 POU5F1BQ06416 359 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 CYP24A1Q07973 514 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 PPP3CAQ08209 521 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 NBPF20Q3BBV1 942 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 SEZ6Q53EL9 994 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 SLFN12LQ6IEE8 588 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 CCSAPQ6IQ19 270 aaPredicted RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 NEK11Q8NG66 645 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 KIAA1524Q8TCG1 905 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 DNAJB3Q8WWF6 145 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 CCDC127Q96BQ5 260 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 BAG1Q99933 345 aaPredicted RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 BEGAINQ9BUH8 593 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 GINS2Q9Y248 185 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 LUC7L2Q9Y383 392 aaKnown RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 TOM1L1O75674 476 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 GRK4P32298 578 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 MYL7Q01449 175 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 AMHR2Q16671 573 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 EXOC3L4Q17RC7 722 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 CRELD2Q6UXH1 353 aaPredicted RBP19.25■□□□□ 0.67
HERC2-208ENST00000566635 CCDC112Q8NEF3 446 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 MFSD14AQ96MC6 490 aa19.25■□□□□ 0.67
HERC2-208ENST00000566635 ADAMTS10Q9H324 1103 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms