RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 RFX1P22670 979 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 RDXP35241 583 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 PTGIRP43119 386 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 TRAF1Q13077 416 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 SWT1Q5T5J6 900 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 C11orf63Q6NUN7 778 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 SLC47A2Q86VL8 602 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 ZDHHC14Q8IZN3 488 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 ELMO3Q96BJ8 720 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 CCDC127Q96BQ5 260 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 PCDHB18PQ96TA0 734 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 GRHL1Q9NZI5 618 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 RPTORQ8N122 1335 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 PODXLO00592 558 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 NUDT17P0C025 328 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 PLCB4Q15147 1175 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 MSL1Q68DK7 614 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 CCDC91Q7Z6B0 441 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 PRMT1Q99873 361 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 FAM129AQ9BZQ8 928 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 TAOK3Q9H2K8 898 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 INTS9Q9NV88 658 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 FBXO28Q9NVF7 368 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 DBR1Q9UK59 544 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 MTUS1Q9ULD2 1270 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 MRPL11Q9Y3B7 192 aaKnown RBP15.32■□□□□ 0.04
CDH1-209ENST00000566510 THSD7AQ9UPZ6 1657 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 SCN9AQ15858 1988 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 SCTRP47872 440 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 PPP1R7Q15435 360 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 AOC3Q16853 763 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
CDH1-209ENST00000566510 SLC9A9Q8IVB4 645 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 ANKS4BQ8N8V4 417 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 XXYLT1Q8NBI6 393 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 HVCN1Q96D96 273 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 ACCSQ96QU6 501 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 NUP85Q9BW27 656 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 TMEM206Q9H813 350 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 HSPBP1Q9NZL4 362 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 PFASO15067 1338 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 TMEM150BA6NC51 233 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 C5orf60A6NFR6 353 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 MMP10P09238 476 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 MXI1P50539 228 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 SNX1Q13596 522 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 SPDYCQ5MJ68 293 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 C6orf118Q5T5N4 469 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 CCDC197Q8NCU1 140 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 ZNF564Q8TBZ8 553 aaPredicted RBP15.31■□□□□ 0.04
CDH1-209ENST00000566510 ZNF653Q96CK0 615 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 MRIQ9BWK5 157 aa15.31■□□□□ 0.04
CDH1-209ENST00000566510 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 SLC16A4O15374 487 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 RASSF9O75901 435 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 HSPA6P17066 643 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 DRG2P55039 364 aaKnown RBP15.3■□□□□ 0.04
CDH1-209ENST00000566510 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 OTUD6AQ7L8S5 288 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 CHURC1Q8WUH1 139 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 PGM2Q96G03 612 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 POP1Q99575 1024 aaKnown RBP15.3■□□□□ 0.04
CDH1-209ENST00000566510 PARP2Q9UGN5 583 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 PCYOX1Q9UHG3 505 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 LTBP4Q8N2S1 1624 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 RASGRF2O14827 1237 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 DLATP10515 647 aaKnown RBP15.3■□□□□ 0.04
CDH1-209ENST00000566510 CTNNA2P26232 953 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 MMP13P45452 471 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 PEX5P50542 639 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 ADCY2Q08462 1091 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 CALCOCO2Q13137 446 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 MGARPQ8TDB4 240 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 EPS8L1Q8TE68 723 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 ELAC2Q9BQ52 826 aaKnown RBP15.3■□□□□ 0.04
CDH1-209ENST00000566510 WNT8AQ9H1J5 351 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDH1-209ENST00000566510 ITGB5P18084 799 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 COILP38432 576 aaPredicted RBP15.3■□□□□ 0.04
CDH1-209ENST00000566510 PEX3P56589 373 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 IRX3P78415 501 aaPredicted RBP15.3■□□□□ 0.04
CDH1-209ENST00000566510 RASA3Q14644 834 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 CYB5D1Q6P9G0 228 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 HAUS6Q7Z4H7 955 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
CDH1-209ENST00000566510 PLEKHO2Q8TD55 490 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms