RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 DGAT1O75907 488 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 LYPLA2O95372 231 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 POMCP01189 267 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 EPCAMP16422 314 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 FOSBP53539 338 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 PTENP60484 403 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 NHLH1Q02575 133 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
UBR1-206ENST00000566493 UBXN11Q5T124 520 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 CABP7Q86V35 215 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 DIS3L2Q8IYB7 885 aaKnown RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 FBXL6Q8N531 539 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 C12orf76Q8N812 135 aaPredicted RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 BCL7CQ8WUZ0 217 aaPredicted RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 PRRX2Q99811 253 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 HSD17B14Q9BPX1 270 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 TRIM6Q9C030 488 aaPredicted RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 POMKQ9H5K3 350 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 DBR1Q9UK59 544 aaKnown RBP13.28□□□□□ -0.28
UBR1-206ENST00000566493 TECTAO75443 2155 aa13.28□□□□□ -0.28
UBR1-206ENST00000566493 NRP1O14786 923 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 TSPAN1O60635 241 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 NR1I2O75469 434 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 DDHD2O94830 711 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 LARGE1O95461 756 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
UBR1-206ENST00000566493 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 KLRC2P26717 231 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 POU5F1BQ06416 359 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 PTPN14Q15678 1187 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 SMG8Q8ND04 991 aaKnown RBP13.27□□□□□ -0.29
UBR1-206ENST00000566493 SLC22A17Q8WUG5 538 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 CPB2Q96IY4 423 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 XPNPEP1Q9NQW7 623 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
UBR1-206ENST00000566493 CDH22Q9UJ99 828 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 IPPQ9Y573 584 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 TRIOO75962 3097 aa13.27□□□□□ -0.29
UBR1-206ENST00000566493 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 JAK2O60674 1132 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 URODP06132 367 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 XRCC6P12956 609 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBR1-206ENST00000566493 ATP2B1P20020 1258 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 OR1G1P47890 313 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 AFF1P51825 1210 aaKnown RBP13.26□□□□□ -0.29
UBR1-206ENST00000566493 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 KIAA1841Q6NSI8 718 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 ELMSAN1Q6PJG2 1045 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 UBALD2Q8IYN6 164 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 TDRD5Q8NAT2 981 aaKnown RBP13.26□□□□□ -0.29
UBR1-206ENST00000566493 KREMEN2Q8NCW0 462 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 KLHL5Q96PQ7 755 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 GAD1Q99259 594 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 APOL6Q9BWW8 343 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 VN1R3Q9BXE9 311 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 EIF2AQ9BY44 585 aaKnown RBP13.26□□□□□ -0.29
UBR1-206ENST00000566493 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 SORCS3Q9UPU3 1222 aa13.26□□□□□ -0.29
UBR1-206ENST00000566493 MUC6Q6W4X9 2439 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 C2CD2LO14523 706 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 B4GALT3O60512 393 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 SEC24BO95487 1268 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 CNPP09543 421 aaKnown RBP13.25□□□□□ -0.29
UBR1-206ENST00000566493 MCM7P33993 719 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 ARL2P36404 184 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 MLH1P40692 756 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 RARRES1P49788 294 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 MRE11P49959 708 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 PTPN5P54829 565 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 MBTD1Q05BQ5 628 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 CAPSQ13938 189 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 TMC5Q6UXY8 1006 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 PIGOQ8TEQ8 1089 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 NFKBIZQ9BYH8 718 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 POLR3FQ9H1D9 316 aaPredicted RBP13.25□□□□□ -0.29
UBR1-206ENST00000566493 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
UBR1-206ENST00000566493 PRG3Q9Y2Y8 225 aaPredicted RBP13.25□□□□□ -0.29
UBR1-206ENST00000566493 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
UBR1-206ENST00000566493 POTEMA6NI47 508 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 LRRIQ4A6NIV6 560 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 USO1O60763 962 aaKnown RBP13.24□□□□□ -0.29
UBR1-206ENST00000566493 SOD2P04179 222 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
UBR1-206ENST00000566493 GLRA2P23416 452 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 CLCN4P51793 760 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 IER5LQ5T953 404 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 SLC27A1Q6PCB7 646 aa13.24□□□□□ -0.29
UBR1-206ENST00000566493 MAEAQ7L5Y9 396 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms