RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 BCL7CQ8WUZ0 217 aaPredicted RBP22.37■■□□□ 1.17
CLN6-207ENST00000566347 RPGRIP1Q96KN7 1286 aa22.37■■□□□ 1.17
CLN6-207ENST00000566347 FAN1Q9Y2M0 1017 aa22.37■■□□□ 1.17
CLN6-207ENST00000566347 LRRIQ4A6NIV6 560 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 B4GALT3O60512 393 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 POMCP01189 267 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 PLA2G5P39877 138 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 ITIH3Q06033 890 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 RABEP1Q15276 862 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 CES5AQ6NT32 575 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 POTEGQ6S5H5 508 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 FAM122AQ96E09 287 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 PRIMPOLQ96LW4 560 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 DZANK1Q9NVP4 752 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 KIF3AQ9Y496 699 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 TRIOO75962 3097 aa22.36■■□□□ 1.17
CLN6-207ENST00000566347 ARL5CA6NH57 179 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 U2AF2P26368 475 aaKnown RBP eCLIP22.35■■□□□ 1.17
CLN6-207ENST00000566347 FXR2P51116 673 aaKnown RBP eCLIP22.35■■□□□ 1.17
CLN6-207ENST00000566347 SLC27A1Q6PCB7 646 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 MAEAQ7L5Y9 396 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 PPFIBP1Q86W92 1011 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 ZBTB8OSQ8IWT0 167 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 AUTS2Q8WXX7 1259 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 NECTIN4Q96NY8 510 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 GAD1Q99259 594 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 APOL5Q9BWW9 433 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 ADAM7Q9H2U9 754 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 GPRC5CQ9NQ84 441 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 PRMT7Q9NVM4 692 aaPredicted RBP22.35■■□□□ 1.17
CLN6-207ENST00000566347 GIT1Q9Y2X7 761 aa22.35■■□□□ 1.17
CLN6-207ENST00000566347 A0A1B0GUA9 196 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 ARHGEF35A5YM69 484 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 NRP1O14786 923 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 ST18O60284 1047 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 MLH1P40692 756 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 PTPN14Q15678 1187 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 CDCA2Q69YH5 1023 aaPredicted RBP22.34■■□□□ 1.17
CLN6-207ENST00000566347 PADI6Q6TGC4 694 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 PPP4R3CPQ6ZMV5 832 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 EDAQ92838 391 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 VN1R3Q9BXE9 311 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 EMILIN2Q9BXX0 1053 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 C2orf40Q9H1Z8 148 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 RNF39Q9H2S5 420 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 HES2Q9Y543 173 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 STK24Q9Y6E0 443 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 ZMYM2Q9UBW7 1377 aa22.34■■□□□ 1.17
CLN6-207ENST00000566347 B4GALT5O43286 388 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 NR1I2O75469 434 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 CYP11B2P19099 503 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 FAM187BQ17R55 369 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 COLGALT2Q8IYK4 626 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 C4orf32Q8N8J7 132 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 APOL6Q9BWW8 343 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 RAB34Q9BZG1 259 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 NXF3Q9H4D5 531 aaKnown RBP22.33■■□□□ 1.17
CLN6-207ENST00000566347 LRWD1Q9UFC0 647 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 NR2E1Q9Y466 385 aa22.33■■□□□ 1.17
CLN6-207ENST00000566347 TDRD15B5MCY1 1934 aaKnown RBP22.33■■□□□ 1.16
CLN6-207ENST00000566347 NPTXRO95502 500 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 CCT6AP40227 531 aaKnown RBP22.32■■□□□ 1.16
CLN6-207ENST00000566347 MTHFRP42898 656 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 OR1G1P47890 313 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 SCNN1GP51170 649 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 DSC1Q08554 894 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 PDIA5Q14554 519 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 SLC22A17Q8WUG5 538 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 RIPOR3Q96MK2 946 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 ZFP42Q96MM3 310 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 FZD8Q9H461 694 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 MRPL17Q9NRX2 175 aaKnown RBP22.32■■□□□ 1.16
CLN6-207ENST00000566347 SSX2IPQ9Y2D8 614 aa22.32■■□□□ 1.16
CLN6-207ENST00000566347 PRG3Q9Y2Y8 225 aaPredicted RBP22.32■■□□□ 1.16
CLN6-207ENST00000566347 LAD1O00515 517 aa22.31■■□□□ 1.16
CLN6-207ENST00000566347 SOD2P04179 222 aa22.31■■□□□ 1.16
CLN6-207ENST00000566347 NBR1Q14596 966 aa22.31■■□□□ 1.16
CLN6-207ENST00000566347 PPP2R5AQ15172 486 aa22.31■■□□□ 1.16
CLN6-207ENST00000566347 UPF2Q9HAU5 1272 aaKnown RBP22.31■■□□□ 1.16
CLN6-207ENST00000566347 MARCH5Q9NX47 278 aa22.31■■□□□ 1.16
CLN6-207ENST00000566347 SSBP05455 408 aaKnown RBP eCLIP22.3■■□□□ 1.16
CLN6-207ENST00000566347 URODP06132 367 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 EPCAMP16422 314 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 AKAP5P24588 427 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 NAMPTP43490 491 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 ZXDAP98168 799 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 PTGDRQ13258 359 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 MAPK6Q16659 721 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 RARS2Q5T160 578 aaKnown RBP22.3■■□□□ 1.16
CLN6-207ENST00000566347 CABP7Q86V35 215 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 CDR2LQ86X02 465 aaPredicted RBP22.3■■□□□ 1.16
CLN6-207ENST00000566347 IGSF22Q8N9C0 903 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 MFSD14AQ96MC6 490 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 KLHL5Q96PQ7 755 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 HERC2P3Q9BVR0 1158 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 MIOSQ9NXC5 875 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 DAXXQ9UER7 740 aaPredicted RBP22.3■■□□□ 1.16
CLN6-207ENST00000566347 TECTAO75443 2155 aa22.3■■□□□ 1.16
CLN6-207ENST00000566347 N4BP3O15049 544 aa22.29■■□□□ 1.16
CLN6-207ENST00000566347 LILRB3O75022 631 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms