RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 PCDHB6Q9Y5E3 794 aa3.57□□□□□ -1.84
SMG1-212ENST00000566328 MYPNQ86TC9 1320 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 ST20-MTHFSA0A0A6YYL1 179 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 FAM221BA6H8Z2 402 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 NRP2O60462 931 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 PCDH8O95206 1070 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 RBP3P10745 1247 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 TYRP1P17643 537 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 CD40P25942 277 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 DDX6P26196 483 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMG1-212ENST00000566328 GPR15P49685 360 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 NRG3P56975 720 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 KRTAP10-9P60411 292 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 NHLH2Q02577 135 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 CD69Q07108 199 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 C2orf27AQ580R0 203 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 CCDC178Q5BJE1 867 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 SOGA3Q5TF21 947 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 UNQ6494/PRO21346Q6UXR6 183 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 TAS1R1Q7RTX1 841 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 GPRIN1Q7Z2K8 1008 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 CDYL2Q8N8U2 506 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 BOLLQ8N9W6 283 aaKnown RBP3.56□□□□□ -1.84
SMG1-212ENST00000566328 SIMC1Q8NDZ2 872 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 CPEB3Q8NE35 698 aaKnown RBP3.56□□□□□ -1.84
SMG1-212ENST00000566328 ZNF428Q96B54 188 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 ARMC5Q96C12 935 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 SRPK1Q96SB4 655 aaKnown RBP3.56□□□□□ -1.84
SMG1-212ENST00000566328 LSM14BQ9BX40 385 aaKnown RBP3.56□□□□□ -1.84
SMG1-212ENST00000566328 PODXL2Q9NZ53 605 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 RNF181Q9P0P0 153 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 DKK2Q9UBU2 259 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 ZKSCAN5Q9Y2L8 839 aa3.56□□□□□ -1.84
SMG1-212ENST00000566328 KRTAP29-1A8MX34 341 aaPredicted RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 B5MCH6 92 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 RAPGEF3O95398 923 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 LY86O95711 162 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 ESRRBO95718 433 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 ZSCAN20P17040 1043 aaPredicted RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 ITGB6P18564 788 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 GTF2F1P35269 517 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMG1-212ENST00000566328 RNASE9P60153 205 aaKnown RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 MPP3Q13368 585 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 LRRC32Q14392 662 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 NAALADL2Q58DX5 795 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 PIK3R6Q5UE93 754 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 PAPD7Q5XG87 772 aaKnown RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 ESRP1Q6NXG1 681 aaKnown RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 LMBR1LQ6UX01 489 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 ESPNLQ6ZVH7 1005 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 PASD1Q8IV76 773 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 PIK3C3Q8NEB9 887 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 RTF1Q92541 710 aaKnown RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 MKL1Q969V6 931 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 FERMT2Q96AC1 680 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 DUSP26Q9BV47 211 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 INTS7Q9NVH2 962 aaKnown RBP3.55□□□□□ -1.84
SMG1-212ENST00000566328 POGKQ9P215 609 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 TLK1Q9UKI8 766 aa3.55□□□□□ -1.84
SMG1-212ENST00000566328 COL11A2P13942 1736 aaPredicted RBP3.54□□□□□ -1.84
SMG1-212ENST00000566328 CBX4O00257 560 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 LEFTY2O00292 366 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 CFBP00751 764 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 CLEC2LP0C7M8 214 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 PTTG1IPP53801 180 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 APBA1Q02410 837 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 FOXI1Q12951 378 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 ZNF362Q5T0B9 420 aaPredicted RBP3.54□□□□□ -1.84
SMG1-212ENST00000566328 EFCAB12Q6NXP0 572 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 MICALCLQ6ZW33 695 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 BHLHA9Q7RTU4 235 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 XYLT1Q86Y38 959 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 OR10H5Q8NGA6 315 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 CDC5LQ99459 802 aaKnown RBP3.54□□□□□ -1.84
SMG1-212ENST00000566328 LRFN3Q9BTN0 628 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 PRDM13Q9H4Q3 707 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 IFT57Q9NWB7 429 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 OXSMQ9NWU1 459 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 PTCH2Q9Y6C5 1203 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 FPGT-TNNI3KV9GXZ4 949 aa3.54□□□□□ -1.84
SMG1-212ENST00000566328 UNC119BA6NIH7 251 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 ZNF185O15231 689 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 GAS7O60861 476 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 SEC24DO94855 1032 aaPredicted RBP3.53□□□□□ -1.84
SMG1-212ENST00000566328 JMJD7P0C870 316 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 RBL2Q08999 1139 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 CFAP100Q494V2 611 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 SPDYE7PQ495Y7 208 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 PDZD4Q76G19 769 aaPredicted RBP3.53□□□□□ -1.84
SMG1-212ENST00000566328 GLB1L2Q8IW92 636 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 GAB3Q8WWW8 586 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMG1-212ENST00000566328 USP18Q9UMW8 372 aa3.53□□□□□ -1.84
SMG1-212ENST00000566328 MAST3O60307 1309 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 TBKBP1A7MCY6 615 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 PROB1E7EW31 1015 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 FOSP01100 380 aaPredicted RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 EGR2P11161 476 aaPredicted RBP3.52□□□□□ -1.85
SMG1-212ENST00000566328 ITGAMP11215 1152 aa3.52□□□□□ -1.85
SMG1-212ENST00000566328 RESTQ13127 1097 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms