RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SNRPFP62306 86 aaKnown RBP16.21■□□□□ 0.19
SPG7-213ENST00000566221 PAK1Q13153 545 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 CT47A1Q5JQC4 288 aaPredicted RBP16.21■□□□□ 0.19
SPG7-213ENST00000566221 ATF7IP2Q5U623 682 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 KLHL10Q6JEL2 608 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 MFSD5Q6N075 450 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 NOTUMQ6P988 496 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 APBB2Q92870 758 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 CCDC51Q96ER9 411 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 ACO2Q99798 780 aaKnown RBP16.21■□□□□ 0.19
SPG7-213ENST00000566221 TARS2Q9BW92 718 aaKnown RBP16.21■□□□□ 0.19
SPG7-213ENST00000566221 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 CTNND2Q9UQB3 1225 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 PIN4Q9Y237 131 aaKnown RBP16.21■□□□□ 0.19
SPG7-213ENST00000566221 TNFSF13BQ9Y275 285 aa16.21■□□□□ 0.19
SPG7-213ENST00000566221 BICDL2A1A5D9 508 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 TTLL13PA6NNM8 815 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 TOM1L1O75674 476 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 CAVIN2O95810 425 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 CCNE1P24864 410 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 ITGB8P26012 769 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 LRRC63Q05C16 580 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
SPG7-213ENST00000566221 PLEKHG4Q58EX7 1191 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 CENPPQ6IPU0 288 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 LRSAM1Q6UWE0 723 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 APBB1IPQ7Z5R6 666 aaPredicted RBP16.2■□□□□ 0.18
SPG7-213ENST00000566221 NELFBQ8WX92 580 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 SEPT8Q92599 483 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 P2RX5Q93086 422 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 CPB2Q96IY4 423 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 TSG101Q99816 390 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 ADPGKQ9BRR6 497 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 OSBPL7Q9BZF2 842 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 PDZD7Q9H5P4 517 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 CHST12Q9NRB3 414 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 ANKFY1Q9P2R3 1169 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 A0A0C4DFX4 3053 aa16.2■□□□□ 0.18
SPG7-213ENST00000566221 CALUO43852 315 aaPredicted RBP16.19■□□□□ 0.18
SPG7-213ENST00000566221 PFKMP08237 780 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 PROZP22891 400 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 ERCC5P28715 1186 aaPredicted RBP16.19■□□□□ 0.18
SPG7-213ENST00000566221 HOXA11P31270 313 aaPredicted RBP16.19■□□□□ 0.18
SPG7-213ENST00000566221 GSE1Q14687 1217 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 GPNMBQ14956 572 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 DCAF4L1Q3SXM0 396 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 ZNF568Q3ZCX4 644 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 ANO6Q4KMQ2 910 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 ZCWPW2Q504Y3 356 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 SLFN12LQ6IEE8 588 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 SLC39A4Q6P5W5 647 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 SLC27A1Q6PCB7 646 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 MPZL3Q6UWV2 235 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
SPG7-213ENST00000566221 FTHL17Q9BXU8 183 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 NAT10Q9H0A0 1025 aaKnown RBP16.19■□□□□ 0.18
SPG7-213ENST00000566221 DNAJC25Q9H1X3 360 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 TRAF3IP3Q9Y228 551 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 NR2E3Q9Y5X4 410 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 STYXL1Q9Y6J8 313 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 TTC3P53804 2025 aa16.19■□□□□ 0.18
SPG7-213ENST00000566221 TDRD15B5MCY1 1934 aaKnown RBP16.18■□□□□ 0.18
SPG7-213ENST00000566221 PTPRSQ13332 1948 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 A0A1B0GUA9 196 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 ANKRD63C9JTQ0 380 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 CLDN3O15551 220 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 TGFB1I1O43294 461 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 CSF2RAP15509 400 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
SPG7-213ENST00000566221 GARTP22102 1010 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.18
SPG7-213ENST00000566221 PPIGQ13427 754 aaKnown RBP eCLIP16.18■□□□□ 0.182e-8■■■□□ 14.7
SPG7-213ENST00000566221 NOLC1Q14978 699 aaKnown RBP eCLIP16.18■□□□□ 0.18
SPG7-213ENST00000566221 NFIL3Q16649 462 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 EDRF1Q3B7T1 1238 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 ARMCX5Q6P1M9 558 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 CNKSR3Q6P9H4 555 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 DEFB128Q7Z7B8 93 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 C12orf56Q8IXR9 622 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 RPUSD2Q8IZ73 545 aaKnown RBP16.18■□□□□ 0.18
SPG7-213ENST00000566221 TMX1Q9H3N1 280 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 USP20Q9Y2K6 914 aa16.18■□□□□ 0.18
SPG7-213ENST00000566221 TISP43B9A030 160 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 ABLIM1O14639 778 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 KIAA0391O15091 583 aaKnown RBP16.17■□□□□ 0.18
SPG7-213ENST00000566221 MCF2P10911 925 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 RAB27AP51159 221 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 FPGSQ05932 587 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 MCL1Q07820 350 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
SPG7-213ENST00000566221 DSC3Q14574 896 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 TWF2Q6IBS0 349 aaKnown RBP16.17■□□□□ 0.18
SPG7-213ENST00000566221 DBF4BQ8NFT6 615 aa16.17■□□□□ 0.18
SPG7-213ENST00000566221 TMEM174Q8WUU8 243 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms