RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DDX10Q13206 875 aaKnown RBP5.32□□□□□ -1.56
LINC00561-201ENST00000565815 TOM1L2Q6ZVM7 507 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 INCENPQ9NQS7 918 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ANLNQ9NQW6 1124 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 DNAJC28Q9NX36 388 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 DPP7Q9UHL4 492 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 EVLQ9UI08 416 aaPredicted RBP5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ADGRB1O14514 1584 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 N4BP3O15049 544 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ULK1O75385 1050 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 NR1I3Q14994 352 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 PPP2R5AQ15172 486 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 SLFN12LQ6IEE8 588 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 CYP4F22Q6NT55 531 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 COL23A1Q86Y22 540 aaPredicted RBP5.32□□□□□ -1.56
LINC00561-201ENST00000565815 TSPEARQ8WU66 669 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ZBTB8AQ96BR9 441 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 MKS1Q9NXB0 559 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ZNF180Q9UJW8 692 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 CROTQ9UKG9 612 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 USP18Q9UMW8 372 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 TOMM70O94826 608 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 IGFBP6P24592 240 aaPredicted RBP5.32□□□□□ -1.56
LINC00561-201ENST00000565815 LSP1P33241 339 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 MLLT6P55198 1093 aaPredicted RBP5.32□□□□□ -1.56
LINC00561-201ENST00000565815 LGALS4P56470 323 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 CD83Q01151 205 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 OCRLQ01968 901 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ZNF267Q14586 743 aaPredicted RBP5.32□□□□□ -1.56
LINC00561-201ENST00000565815 RGL3Q3MIN7 710 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 TEKT5Q96M29 485 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ACSS2Q9NR19 701 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 SIRT5Q9NXA8 310 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 PTPN22Q9Y2R2 807 aa5.32□□□□□ -1.56
LINC00561-201ENST00000565815 ARHGEF28Q8N1W1 1705 aaKnown RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 TSPAN6O43657 245 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 KRT1P04264 644 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 PF4V1P10720 104 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 ZSCAN20P17040 1043 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 C5AR1P21730 350 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 GJA4P35212 333 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 STAT5BP51692 787 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 ALDH6A1Q02252 535 aaKnown RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 PNMA8AQ86V59 439 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 BCL6BQ8N143 479 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 MARCH10Q8NA82 808 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 TTLL11Q8NHH1 800 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 CHMP4CQ96CF2 233 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 FDXACB1Q9BRP7 624 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 CDH19Q9H159 772 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 KCTD10Q9H3F6 313 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 ACEP12821 1306 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 TTC21AQ8NDW8 1320 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 ABLIM3O94929 683 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 HMGB1P09429 215 aaKnown RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 ENPP1P22413 925 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 CD40P25942 277 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 VASNQ6EMK4 673 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 DTX3Q8N9I9 347 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 MZB1Q8WU39 189 aa5.31□□□□□ -1.56
LINC00561-201ENST00000565815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC00561-201ENST00000565815 CICQ96RK0 1608 aaPredicted RBP5.3□□□□□ -1.56
LINC00561-201ENST00000565815 PLEKHG2Q9H7P9 1386 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 K7ESF4 209 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 ETV2O00321 342 aaPredicted RBP5.3□□□□□ -1.56
LINC00561-201ENST00000565815 CYP17A1P05093 508 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 NKX3-2P78367 333 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 CACNB2Q08289 660 aaPredicted RBP5.3□□□□□ -1.56
LINC00561-201ENST00000565815 GAREM2Q75VX8 874 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 TRIM48Q8IWZ4 208 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 TIFAQ96CG3 184 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 EPB41L4BQ9H329 900 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 ARHGAP20Q9P2F6 1191 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 COL18A1P39060 1754 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 USP6P35125 1406 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 KIAA1210Q9ULL0 1709 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 WNT10BO00744 389 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 EPHA7Q15375 998 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 FSCN1Q16658 493 aaKnown RBP5.3□□□□□ -1.56
LINC00561-201ENST00000565815 KANK2Q63ZY3 851 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 KCNK18Q7Z418 384 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 TMEFF1Q8IYR6 380 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 SIN3AQ96ST3 1273 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 MPHOSPH9Q99550 1183 aa5.3□□□□□ -1.56
LINC00561-201ENST00000565815 CPSF1Q10570 1443 aaKnown RBP5.3□□□□□ -1.56
LINC00561-201ENST00000565815 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 QRICH2Q9H0J4 1663 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 COL6A1P12109 1028 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 SLC9A5Q14940 896 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC00561-201ENST00000565815 GPR155Q7Z3F1 870 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 PHYKPLQ8IUZ5 450 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 FBXO18Q8NFZ0 1043 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
LINC00561-201ENST00000565815 CDK19Q9BWU1 502 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 SLC12A5Q9H2X9 1139 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 TMX1Q9H3N1 280 aa5.29□□□□□ -1.56
LINC00561-201ENST00000565815 FAN1Q9Y2M0 1017 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms