RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ECI2O75521 394 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 POMCP01189 267 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 OR1G1P47890 313 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 FNTBP49356 437 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 DNM2P50570 870 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 SF3A2Q15428 464 aaKnown RBP10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 USP41Q3LFD5 358 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 DENND4AQ7Z401 1863 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 MRPL10Q7Z7H8 261 aaKnown RBP10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 LONP2Q86WA8 852 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 TEX2Q8IWB9 1127 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 LOXL4Q96JB6 756 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 SALL3Q9BXA9 1300 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 ARRDC1-AS1Q9H2J1 176 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 DOCK5Q9H7D0 1870 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 LY9Q9HBG7 655 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 UBN1Q9NPG3 1134 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 CHST7Q9NS84 486 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 TBC1D22BQ9NU19 505 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 ANKFY1Q9P2R3 1169 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 CNTNAP2Q9UHC6 1331 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 PIN4Q9Y237 131 aaKnown RBP10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 PRG3Q9Y2Y8 225 aaPredicted RBP10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 PCDHB2Q9Y5E7 798 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 PCDHA10Q9Y5I2 948 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 MEIS3P2A8K0S8 358 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 NTHL1P78549 312 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 FOXC1Q12948 553 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 PPM1LQ5SGD2 360 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 LIN9Q5TKA1 542 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 ZNF746Q6NUN9 644 aaPredicted RBP10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 CWC27Q6UX04 472 aaKnown RBP10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 AGMOQ6ZNB7 445 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 NIPA1Q7RTP0 329 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 CATSPER4Q7RTX7 472 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 GLYCTKQ8IVS8 523 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 SMAP1Q8IYB5 467 aaPredicted RBP10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 SPEM1Q8N4L4 309 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 FAM3CQ92520 227 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 DNASE1L2Q92874 299 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 ADAM33Q9BZ11 813 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 OSBPL3Q9H4L5 887 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 RSAD1Q9HA92 442 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 GABBR1Q9UBS5 961 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 KCNH3Q9ULD8 1083 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 POLIQ9UNA4 740 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
VPS9D1-205ENST00000565452 BAZ2BQ9UIF8 2168 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 A0A087WZ62 844 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 HIP1O00291 1037 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 IPO5O00410 1097 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 DHX15O43143 795 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 B4GALT3O60512 393 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 EFEMP2O95967 443 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 NOVA1P51513 510 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 SATB1Q01826 763 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 SRSF5Q13243 272 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 B4GALNT3Q6L9W6 998 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 PLA2G4DQ86XP0 818 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 COLGALT2Q8IYK4 626 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 RNF168Q8IYW5 571 aaPredicted RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 CNNM3Q8NE01 707 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 ITFG1Q8TB96 612 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 ZCCHC14Q8WYQ9 949 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 MBOAT7Q96N66 472 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 FDXACB1Q9BRP7 624 aaPredicted RBP10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 BRD9Q9H8M2 597 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 SENP2Q9HC62 589 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 DIAPH3Q9NSV4 1193 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 GDE1Q9NZC3 331 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 SAMM50Q9Y512 469 aa10.18□□□□□ -0.78
VPS9D1-205ENST00000565452 SPEGQ15772 3267 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 HOXA9P31269 272 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 AFF1P51825 1210 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 UVSSAQ2YD98 709 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 RNF43Q68DV7 783 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 HEATR6Q6AI08 1181 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 CACNA2D4Q7Z3S7 1137 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 ZNF410Q86VK4 478 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 SRBD1Q8N5C6 995 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 IRF7Q92985 503 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 ELSPBP1Q96BH3 223 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 ZNF577Q9BSK1 485 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 PLA2G2FQ9BZM2 168 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 LNPKQ9C0E8 428 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 MARCH5Q9NX47 278 aa10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 MRPS23Q9Y3D9 190 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 U3KPZ7 1027 aaPredicted RBP10.17□□□□□ -0.78
VPS9D1-205ENST00000565452 SHISA7A6NL88 538 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 EIF4E1BA6NMX2 242 aaKnown RBP10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 CCL16O15467 120 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 DDAH1O94760 285 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 PAPSS2O95340 614 aaPredicted RBP10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 OATP04181 439 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 CHRNB1P11230 501 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 RPL17P18621 184 aaKnown RBP10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 SPINK2P20155 84 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms