RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ZBTB8OSQ8IWT0 167 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 FBXO18Q8NFZ0 1043 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 BCL7CQ8WUZ0 217 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 SUSD6Q92537 303 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 TMEM175Q9BSA9 504 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 POLR3CQ9BUI4 534 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 ZBP1Q9H171 429 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 POLD4Q9HCU8 107 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 GPRC5CQ9NQ84 441 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 SH2B1Q9NRF2 756 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 MIOSQ9NXC5 875 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 LRWD1Q9UFC0 647 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 DBR1Q9UK59 544 aaKnown RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 SSX2IPQ9Y2D8 614 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 PRG3Q9Y2Y8 225 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 ARIH1Q9Y4X5 557 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 COL4A4P53420 1690 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 COL6A3P12111 3177 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 TCF20Q9UGU0 1960 aaKnown RBP7.1□□□□□ -1.27
TCF4-228ENST00000565393 A0A1B0GUA9 196 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 TMEM221A6NGB7 291 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 M0R296 226 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 B4GALT5O43286 388 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 CNPP09543 421 aaKnown RBP7.1□□□□□ -1.27
TCF4-228ENST00000565393 SPATA31D3P0C874 917 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 CYP11B2P19099 503 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 RPA1P27694 616 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 MTHFRP42898 656 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 SCNN1GP51170 649 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 NBR1Q14596 966 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 SLC27A1Q6PCB7 646 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 PADI6Q6TGC4 694 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 TMC5Q6UXY8 1006 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 SPATA31D4Q6ZUB0 917 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 SUGP1Q8IWZ8 645 aaKnown RBP7.1□□□□□ -1.27
TCF4-228ENST00000565393 COLGALT2Q8IYK4 626 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 MCPH1Q8NEM0 835 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 DEPTORQ8TB45 409 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 SLC22A17Q8WUG5 538 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 RABGGTAQ92696 567 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 CCDC51Q96ER9 411 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 IFT74Q96LB3 600 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 FBXL18Q96ME1 805 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 ZFP42Q96MM3 310 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 NECTIN4Q96NY8 510 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 RPS6KC1Q96S38 1066 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 POMKQ9H5K3 350 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 PRMT7Q9NVM4 692 aaPredicted RBP7.1□□□□□ -1.27
TCF4-228ENST00000565393 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 LIMD1Q9UGP4 676 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 CDH22Q9UJ99 828 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 KIAA1024Q9UPX6 916 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 USP20Q9Y2K6 914 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 GIT1Q9Y2X7 761 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 IRAK3Q9Y616 596 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 STK24Q9Y6E0 443 aa7.1□□□□□ -1.27
TCF4-228ENST00000565393 SIP14410 1827 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 K7ERI5 159 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 ST18O60284 1047 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 B4GALT3O60512 393 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 SOD2P04179 222 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 URODP06132 367 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 TRAPPC10P48553 1259 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 CLCN4P51793 760 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 SIGLEC14Q08ET2 396 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 PTGDRQ13258 359 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 ORC2Q13416 577 aaPredicted RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 PRPF4BQ13523 1007 aaKnown RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 PDIA5Q14554 519 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 PTPN14Q15678 1187 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 ZRSR1Q15695 479 aaKnown RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 MAPK6Q16659 721 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 AMHR2Q16671 573 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 PTPN21Q16825 1174 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 ELMSAN1Q6PJG2 1045 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 POTEGQ6S5H5 508 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 ALYREFQ86V81 257 aaKnown RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 CEP57Q86XR8 500 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 PALB2Q86YC2 1186 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 IFNLR1Q8IU57 520 aaPredicted RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 GLYCTKQ8IVS8 523 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 PLCD3Q8N3E9 789 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 ADPGKQ9BRR6 497 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 VN1R3Q9BXE9 311 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 NFKBIZQ9BYH8 718 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 RAB34Q9BZG1 259 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 C2orf40Q9H1Z8 148 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 BHMT2Q9H2M3 363 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 FZD8Q9H461 694 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 NXF3Q9H4D5 531 aaKnown RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 UPF2Q9HAU5 1272 aaKnown RBP7.09□□□□□ -1.27
TCF4-228ENST00000565393 PIDD1Q9HB75 910 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 DNM3Q9UQ16 869 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 KIF3AQ9Y496 699 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 MICAL3Q7RTP6 2002 aa7.09□□□□□ -1.27
TCF4-228ENST00000565393 CCDC195A0A1B0GUA6 201 aa7.08□□□□□ -1.28
TCF4-228ENST00000565393 CCDC169A6NNP5 214 aa7.08□□□□□ -1.28
TCF4-228ENST00000565393 C2CD4DB7Z1M9 353 aa7.08□□□□□ -1.28
TCF4-228ENST00000565393 E9PMD0 336 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms