RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 RGL1Q9NZL6 768 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 IPPQ9Y573 584 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 CACNA1HO95180 2353 aa12.93□□□□□ -0.34
NSMCE1-209ENST00000565384 C2orf16Q68DN1 1984 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 TEX28O15482 410 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 MARCH6O60337 910 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 TSPAN1O60635 241 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 ADH1AP07327 375 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 NPR3P17342 541 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 AOC1P19801 751 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 AXLP30530 894 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 MLH1P40692 756 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 GLUD2P49448 558 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 SCRN1Q12765 414 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 CTTNQ14247 550 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 XKR9Q5GH70 373 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 TAS1R1Q7RTX1 841 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 RNF168Q8IYW5 571 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 DYDC2Q96IM9 177 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 GAD1Q99259 594 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 NAP1L4Q99733 375 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 TM6SF1Q9BZW5 370 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 IGSF9Q9P2J2 1179 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 FBXL21Q9UKT6 434 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 USP34Q70CQ2 3546 aa12.92□□□□□ -0.34
NSMCE1-209ENST00000565384 STK36Q9NRP7 1315 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 ARID2Q68CP9 1835 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CCDC195A0A1B0GUA6 201 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 INPPL1O15357 1258 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 PI15O43692 258 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 N4BP1O75113 896 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CDKL5O76039 1030 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 EFEMP2O95967 443 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 GLUD1P00367 558 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 XBP1P17861 261 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 SCNN1GP51170 649 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CYP4A11Q02928 519 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 DSC1Q08554 894 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 SPIRE1Q08AE8 756 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 PCBP1Q15365 356 aaKnown RBP eCLIP12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 NOTUMQ6P988 496 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 ELMSAN1Q6PJG2 1045 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 FRMD5Q7Z6J6 570 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CCDC105Q8IYK2 499 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 SIX5Q8N196 739 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 STAMQ92783 540 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 NKD2Q969F2 451 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 RXFP1Q9HBX9 757 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 XPNPEP1Q9NQW7 623 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 GJB4Q9NTQ9 266 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 DPP7Q9UHL4 492 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 HES2Q9Y543 173 aa12.91□□□□□ -0.34
NSMCE1-209ENST00000565384 CLUHO75153 1309 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 F8W810 466 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 ZBTB39O15060 712 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 NARSO43776 548 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 MYBP10242 640 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 GBP2P32456 591 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 PTENP60484 403 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 DSG1Q02413 1049 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 TFDP1Q14186 410 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 MXD4Q14582 209 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 EARS2Q5JPH6 523 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 KIAA0319Q5VV43 1072 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 CYP26C1Q6V0L0 522 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 ZFP42Q96MM3 310 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
NSMCE1-209ENST00000565384 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 DTNBO60941 627 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 NR1I2O75469 434 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 RFPL2O75678 378 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 SLITRK3O94933 977 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 CFHP08603 1231 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 MBTD1Q05BQ5 628 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 NCBP1Q09161 790 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 CAPSQ13938 189 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 AMHR2Q16671 573 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 TPH2Q8IWU9 490 aa12.89□□□□□ -0.35
NSMCE1-209ENST00000565384 HACE1Q8IYU2 909 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms