RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MMTAG2Q9BU76 263 aaKnown RBP16.33■□□□□ 0.2
USB1-210ENST00000565151 CSRNP2Q9H175 543 aa16.33■□□□□ 0.2
USB1-210ENST00000565151 HCFC2Q9Y5Z7 792 aa16.33■□□□□ 0.2
USB1-210ENST00000565151 PDCD11Q14690 1871 aaKnown RBP16.33■□□□□ 0.2
USB1-210ENST00000565151 ARL5CA6NH57 179 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 CITO14578 2027 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 NRP1O14786 923 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 LILRB3O75022 631 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 ERLIN2O94905 339 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 CXCL14O95715 111 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 CTSAP10619 480 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 CYP11B2P19099 503 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 CDC25AP30304 524 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 TRAPPC10P48553 1259 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 DSC1Q08554 894 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 ORC2Q13416 577 aaPredicted RBP16.32■□□□□ 0.2
USB1-210ENST00000565151 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
USB1-210ENST00000565151 CDCA2Q69YH5 1023 aaPredicted RBP16.32■□□□□ 0.2
USB1-210ENST00000565151 PADI6Q6TGC4 694 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 RNF135Q8IUD6 432 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 COLGALT2Q8IYK4 626 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 IGSF22Q8N9C0 903 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 SLC22A17Q8WUG5 538 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 NACC1Q96RE7 527 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 FZD8Q9H461 694 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
USB1-210ENST00000565151 CACNG4Q9UBN1 327 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 MUTYHQ9UIF7 546 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 FAM50BQ9Y247 325 aa16.32■□□□□ 0.2
USB1-210ENST00000565151 CNTNAP2Q9UHC6 1331 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 A0A1B0GUA9 196 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 ITGA4P13612 1032 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 EPCAMP16422 314 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 AKAP5P24588 427 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 AXLP30530 894 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 MLH1P40692 756 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 RNASELQ05823 741 aaKnown RBP16.31■□□□□ 0.2
USB1-210ENST00000565151 TFDP1Q14186 410 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 CBX2Q14781 532 aaPredicted RBP16.31■□□□□ 0.2
USB1-210ENST00000565151 TMEM31Q5JXX7 168 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 NOTUMQ6P988 496 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 KCNK18Q7Z418 384 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 C12orf76Q8N812 135 aaPredicted RBP16.31■□□□□ 0.2
USB1-210ENST00000565151 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 KIFC3Q9BVG8 833 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 APOL6Q9BWW8 343 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
USB1-210ENST00000565151 DOCK8Q8NF50 2099 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 LRRIQ4A6NIV6 560 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 DCXO43602 365 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 NPTXRO95502 500 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 SCNN1GP51170 649 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 RNF168Q8IYW5 571 aaPredicted RBP16.3■□□□□ 0.2
USB1-210ENST00000565151 DAW1Q8N136 415 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 RABGGTAQ92696 567 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 TBC1D32Q96NH3 1257 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 KLK14Q9P0G3 267 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 KIAA1024Q9UPX6 916 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 IRAK3Q9Y616 596 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 KMT2EQ8IZD2 1858 aa16.3■□□□□ 0.2
USB1-210ENST00000565151 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.29■□□□□ 0.2
USB1-210ENST00000565151 WEE2P0C1S8 567 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 GJB2P29033 226 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
USB1-210ENST00000565151 PDIA5Q14554 519 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
USB1-210ENST00000565151 FAM187BQ17R55 369 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 HERC4Q5GLZ8 1057 aaPredicted RBP16.29■□□□□ 0.2
USB1-210ENST00000565151 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 URGCPQ8TCY9 931 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 PAAF1Q9BRP4 392 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 TMEM175Q9BSA9 504 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 PHF7Q9BWX1 381 aaPredicted RBP16.29■□□□□ 0.2
USB1-210ENST00000565151 BHMT2Q9H2M3 363 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 PDZD7Q9H5P4 517 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
USB1-210ENST00000565151 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
USB1-210ENST00000565151 ARHGEF35A5YM69 484 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 E9PMD0 336 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 ALDH2P05091 517 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
USB1-210ENST00000565151 CNPP09543 421 aaKnown RBP16.28■□□□□ 0.2
USB1-210ENST00000565151 IGFBP6P24592 240 aaPredicted RBP16.28■□□□□ 0.2
USB1-210ENST00000565151 SLC27A1Q6PCB7 646 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 CNNM3Q8NE01 707 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 LRRC15Q8TF66 581 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 CCDC43Q96MW1 224 aaKnown RBP16.28■□□□□ 0.2
USB1-210ENST00000565151 KLHL5Q96PQ7 755 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 PNMA5Q96PV4 448 aa16.28■□□□□ 0.2
USB1-210ENST00000565151 NOL7Q9UMY1 257 aaKnown RBP16.28■□□□□ 0.2
USB1-210ENST00000565151 PRG3Q9Y2Y8 225 aaPredicted RBP16.28■□□□□ 0.2
USB1-210ENST00000565151 PTGESO14684 152 aa16.27■□□□□ 0.2
USB1-210ENST00000565151 ALADP13716 330 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms