RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ZBTB9Q96C00 473 aa17.89■□□□□ 0.45
CCNF-204ENST00000564333 AGPAT1Q99943 283 aa17.89■□□□□ 0.45
CCNF-204ENST00000564333 XPNPEP1Q9NQW7 623 aa17.89■□□□□ 0.45
CCNF-204ENST00000564333 CYP26B1Q9NR63 512 aa17.89■□□□□ 0.45
CCNF-204ENST00000564333 GOLGA6BA6NDN3 693 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 USP2O75604 605 aaPredicted RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 SUPT20HL2P0C7V6 817 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 ABCB4P21439 1286 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 RTP1P59025 263 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 MCCD1P59942 119 aaPredicted RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 TNNC1P63316 161 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 VGLL4Q14135 290 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 SLC39A4Q6P5W5 647 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 CHST13Q8NET6 341 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 SLC20A1Q8WUM9 679 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 NTPCRQ9BSD7 190 aaKnown RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 SUCLA2Q9P2R7 463 aaPredicted RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 USP20Q9Y2K6 914 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 STXBP5LQ9Y2K9 1186 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 GOLGA8KD6RF30 607 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 OPA1O60313 960 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 EPHB4P54760 987 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 RNASE9P60153 205 aaKnown RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 MAP2K1Q02750 393 aaPredicted RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 EMBQ6PCB8 327 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 PALB2Q86YC2 1186 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 FAM76AQ8TAV0 307 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 KRT12Q99456 494 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 POLR3FQ9H1D9 316 aaPredicted RBP17.88■□□□□ 0.45
CCNF-204ENST00000564333 OSGEPQ9NPF4 335 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 TAS2R14Q9NYV8 317 aa17.88■□□□□ 0.45
CCNF-204ENST00000564333 CEP104O60308 925 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 PHACTR2O75167 634 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 ZBTB48P10074 688 aaPredicted RBP17.87■□□□□ 0.45
CCNF-204ENST00000564333 NNTQ13423 1086 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 STXBP2Q15833 593 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 MTERF2Q49AM1 385 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 TREML2Q5T2D2 321 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 ALS2CLQ60I27 953 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 KRT39Q6A163 491 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.87■□□□□ 0.45
CCNF-204ENST00000564333 SND1Q7KZF4 910 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCNF-204ENST00000564333 NT5DC3Q86UY8 548 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 METTL13Q8N6R0 699 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 DNERQ8NFT8 737 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 SLC35G2Q8TBE7 412 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 ACTRT1Q8TDG2 376 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 POMGNT1Q8WZA1 660 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 KAT5Q92993 513 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 CCDC127Q96BQ5 260 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 IFT74Q96LB3 600 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 SPON1Q9HCB6 807 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 TMEM8AQ9HCN3 771 aa17.87■□□□□ 0.45
CCNF-204ENST00000564333 ZNFX1Q9P2E3 1918 aaKnown RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 PGRMC1O00264 195 aaKnown RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 HNRNPDLO14979 420 aaKnown RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 SHOX2O60902 331 aaPredicted RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 HEXIM1O94992 359 aaKnown RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 PPFIA1Q13136 1202 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 XKR3Q5GH77 459 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 ANKRD35Q8N283 1001 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 PARD3BQ8TEW8 1205 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 ARHGEF26Q96DR7 871 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 FBXL18Q96ME1 805 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 THAP2Q9H0W7 228 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 TMEM59LQ9UK28 342 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 NOC2LQ9Y3T9 749 aaKnown RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 TULP1O00294 542 aaPredicted RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 BUB1BO60566 1050 aaPredicted RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 ICAM3P32942 547 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 SP2Q02086 613 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 CYP24A1Q07973 514 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 EMC2Q15006 297 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 LRRC31Q6UY01 552 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 IFT20Q8IY31 132 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 TMC2Q8TDI7 906 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 SEMA4DQ92854 862 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 BICD1Q96G01 975 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCNF-204ENST00000564333 GDF3Q9NR23 364 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 TOPORSQ9NS56 1045 aaPredicted RBP17.86■□□□□ 0.45
CCNF-204ENST00000564333 ARHGAP28Q9P2N2 729 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 AMFRQ9UKV5 643 aa17.86■□□□□ 0.45
CCNF-204ENST00000564333 H0YCG3 227 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 GLI1P08151 1106 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 USP8P40818 1118 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 ALDH5A1P51649 535 aaPredicted RBP17.85■□□□□ 0.45
CCNF-204ENST00000564333 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 PPATQ06203 517 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 LBX2Q6XYB7 198 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 CYFIP1Q7L576 1253 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 USP37Q86T82 979 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 RPUSD2Q8IZ73 545 aaKnown RBP17.85■□□□□ 0.45
CCNF-204ENST00000564333 GPD1LQ8N335 351 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 PPM1KQ8N3J5 372 aa17.85■□□□□ 0.45
CCNF-204ENST00000564333 HES6Q96HZ4 224 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms