RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 TRIML1Q8N9V2 468 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 BICD1Q96G01 975 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 EIF2AQ9BY44 585 aaKnown RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 HAPLN2Q9GZV7 340 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
CDH11-209ENST00000564317 CHST12Q9NRB3 414 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 TNFSF13BQ9Y275 285 aa17.02■□□□□ 0.32
CDH11-209ENST00000564317 ENPP3O14638 875 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 N4BP3O15049 544 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 TGFB1I1O43294 461 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 FGBP02675 491 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 LIG4P49917 911 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 KNOP1Q1ED39 458 aaKnown RBP17.01■□□□□ 0.31
CDH11-209ENST00000564317 COBLL1Q53SF7 1204 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
CDH11-209ENST00000564317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDH11-209ENST00000564317 SYCP3Q8IZU3 236 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
CDH11-209ENST00000564317 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 GDF15Q99988 308 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 CDT1Q9H211 546 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 KCTD10Q9H3F6 313 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 TMEM206Q9H813 350 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 ANKFY1Q9P2R3 1169 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 EXOC7Q9UPT5 735 aa17.01■□□□□ 0.31
CDH11-209ENST00000564317 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
CDH11-209ENST00000564317 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
CDH11-209ENST00000564317 C9IYK1 514 aa17■□□□□ 0.31
CDH11-209ENST00000564317 TOM1L1O75674 476 aa17■□□□□ 0.31
CDH11-209ENST00000564317 NPTXRO95502 500 aa17■□□□□ 0.31
CDH11-209ENST00000564317 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
CDH11-209ENST00000564317 WDR5P61964 334 aaKnown RBP17■□□□□ 0.31
CDH11-209ENST00000564317 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
CDH11-209ENST00000564317 IKBKEQ14164 716 aa17■□□□□ 0.31
CDH11-209ENST00000564317 DPCR1Q3MIW9 517 aa17■□□□□ 0.31
CDH11-209ENST00000564317 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
CDH11-209ENST00000564317 C9orf50Q5SZB4 431 aa17■□□□□ 0.31
CDH11-209ENST00000564317 SLC27A1Q6PCB7 646 aa17■□□□□ 0.31
CDH11-209ENST00000564317 MPZL3Q6UWV2 235 aa17■□□□□ 0.31
CDH11-209ENST00000564317 ZBTB33Q86T24 672 aa17■□□□□ 0.31
CDH11-209ENST00000564317 ADSSL1Q8N142 457 aa17■□□□□ 0.31
CDH11-209ENST00000564317 CXXC1Q9P0U4 656 aaPredicted RBP17■□□□□ 0.31
CDH11-209ENST00000564317 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
CDH11-209ENST00000564317 BAIAP3O94812 1187 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 HARSP12081 509 aaKnown RBP16.99■□□□□ 0.31
CDH11-209ENST00000564317 ACTN1P12814 892 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 ATF7P17544 494 aaPredicted RBP16.99■□□□□ 0.31
CDH11-209ENST00000564317 IBSPP21815 317 aaPredicted RBP16.99■□□□□ 0.31
CDH11-209ENST00000564317 ADSSP30520 456 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 NLRP12P59046 1061 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 DEFB103AP81534 67 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 MCL1Q07820 350 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
CDH11-209ENST00000564317 HERVK_113Q902F9 699 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 GTPBP4Q9BZE4 634 aaKnown RBP16.99■□□□□ 0.31
CDH11-209ENST00000564317 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 SEMA6BQ9H3T3 888 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 AGPAT3Q9NRZ7 376 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 C1orf112Q9NSG2 853 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 MICAL3Q7RTP6 2002 aa16.99■□□□□ 0.31
CDH11-209ENST00000564317 MCF2P10911 925 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 PMS1P54277 932 aaKnown RBP16.98■□□□□ 0.31
CDH11-209ENST00000564317 FAM189BP81408 668 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDH11-209ENST00000564317 ZCWPW2Q504Y3 356 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 SLC24A5Q71RS6 500 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 ZNF598Q86UK7 904 aaKnown RBP16.98■□□□□ 0.31
CDH11-209ENST00000564317 ECHDC2Q86YB7 292 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 CEP120Q8N960 986 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 CBWD1Q9BRT8 395 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 UBE2OQ9C0C9 1292 aaKnown RBP16.98■□□□□ 0.31
CDH11-209ENST00000564317 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
CDH11-209ENST00000564317 HES2Q9Y543 173 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 IPPQ9Y573 584 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 PCDHB2Q9Y5E7 798 aa16.98■□□□□ 0.31
CDH11-209ENST00000564317 A0A0B4J269 797 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 A0A0U1RQF3 1178 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 SYCE3A1L190 88 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 MEIS3P2A8K0S8 358 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 ZBBXA8MT70 800 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 FAM189A1O60320 539 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 KIF20AO95235 890 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 SHHQ15465 462 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 ZSCAN23Q3MJ62 389 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 KLHL10Q6JEL2 608 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 FAM43BQ6ZT52 329 aaPredicted RBP16.97■□□□□ 0.31
CDH11-209ENST00000564317 TMCO2Q7Z6W1 182 aaPredicted RBP16.97■□□□□ 0.31
CDH11-209ENST00000564317 CRIPAKQ8N1N5 446 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 ADPGKQ9BRR6 497 aa16.97■□□□□ 0.31
CDH11-209ENST00000564317 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms