RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ASIC1P78348 528 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
RNF40-206ENST00000564260 PSMD2Q13200 908 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 KYAT1Q16773 422 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 UBXN11Q5T124 520 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 KRBA2Q6ZNG9 492 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 ABI1Q8IZP0 508 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 ENGASEQ8NFI3 743 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 ACO2Q99798 780 aaKnown RBP18.33■□□□□ 0.52
RNF40-206ENST00000564260 STRA6Q9BX79 667 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 ZHX3Q9H4I2 956 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 PDZD7Q9H5P4 517 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 MRPL44Q9H9J2 332 aaKnown RBP18.33■□□□□ 0.52
RNF40-206ENST00000564260 TBX20Q9UMR3 447 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 EXOC7Q9UPT5 735 aa18.33■□□□□ 0.52
RNF40-206ENST00000564260 UBE4BO95155 1302 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 EIF3DO15371 548 aaKnown RBP eCLIP18.32■□□□□ 0.52
RNF40-206ENST00000564260 PPP1R37O75864 691 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 UPP2O95045 317 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 PROZP22891 400 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 EHHADHQ08426 723 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 TMEM132AQ24JP5 1023 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 ZNF697Q5TEC3 545 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 GLB1LQ6UWU2 654 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 TAS1R3Q7RTX0 852 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 SFR1Q86XK3 245 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 CLP1Q92989 425 aaKnown RBP18.32■□□□□ 0.52
RNF40-206ENST00000564260 CCDC47Q96A33 483 aaKnown RBP18.32■□□□□ 0.52
RNF40-206ENST00000564260 GOLPH3LQ9H4A5 285 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 TMEM206Q9H813 350 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 POLD4Q9HCU8 107 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 PTPRHQ9HD43 1115 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 KANSL3Q9P2N6 904 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 GIT1Q9Y2X7 761 aa18.32■□□□□ 0.52
RNF40-206ENST00000564260 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
RNF40-206ENST00000564260 TCHHQ07283 1943 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 GRXCR1A8MXD5 290 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 B4GALT5O43286 388 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 CA3P07451 260 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 MCF2P10911 925 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 ATF7P17544 494 aaPredicted RBP18.31■□□□□ 0.52
RNF40-206ENST00000564260 POU5F1Q01860 360 aaKnown RBP18.31■□□□□ 0.52
RNF40-206ENST00000564260 COASYQ13057 564 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 SNW1Q13573 536 aaKnown RBP18.31■□□□□ 0.52
RNF40-206ENST00000564260 NT5DC1Q5TFE4 455 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 PPP2R2DQ66LE6 453 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 MPZL3Q6UWV2 235 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 LRRC43Q8N309 656 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 FIBCD1Q8N539 461 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 CPB2Q96IY4 423 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 YBX2Q9Y2T7 364 aaKnown RBP18.31■□□□□ 0.52
RNF40-206ENST00000564260 IPPQ9Y573 584 aa18.31■□□□□ 0.52
RNF40-206ENST00000564260 GOLGA6L22H0YM25 854 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 SOX1O00570 391 aaPredicted RBP18.3■□□□□ 0.52
RNF40-206ENST00000564260 RB1P06400 928 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 ITGA4P13612 1032 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 RABGGTBP53611 331 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
RNF40-206ENST00000564260 MCL1Q07820 350 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 BTG3Q14201 252 aaPredicted RBP18.3■□□□□ 0.52
RNF40-206ENST00000564260 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
RNF40-206ENST00000564260 FAM26FQ5R3K3 315 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
RNF40-206ENST00000564260 SLFN12LQ6IEE8 588 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 ACCSQ96QU6 501 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 TGS1Q96RS0 853 aaKnown RBP18.3■□□□□ 0.52
RNF40-206ENST00000564260 PLVAPQ9BX97 442 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 AAASQ9NRG9 546 aa18.3■□□□□ 0.52
RNF40-206ENST00000564260 LINC01553A4QN01 128 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 HNRNPDLO14979 420 aaKnown RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 CLDN3O15551 220 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 KINO60870 393 aaKnown RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 KIF20AO95235 890 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 PBX2P40425 430 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 AFMP43652 599 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 LIG4P49917 911 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 ERVK-21P61565 698 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 KCNB1Q14721 858 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 POSTNQ15063 836 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 SMG8Q8ND04 991 aaKnown RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 URGCPQ8TCY9 931 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 STAMQ92783 540 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 BICD1Q96G01 975 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 TARS2Q9BW92 718 aaKnown RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 ZNF576Q9H609 170 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 TOPORSQ9NS56 1045 aaPredicted RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 CGNQ9P2M7 1197 aaKnown RBP18.29■□□□□ 0.52
RNF40-206ENST00000564260 STK39Q9UEW8 545 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 STYXL1Q9Y6J8 313 aa18.29■□□□□ 0.52
RNF40-206ENST00000564260 C5orf67F2Z3F1 127 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 GCNT3O95395 438 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 NPTXRO95502 500 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 NMT1P30419 496 aaKnown RBP18.28■□□□□ 0.52
RNF40-206ENST00000564260 GRM5P41594 1212 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 TAP1Q03518 808 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 CUL4BQ13620 913 aa18.28■□□□□ 0.52
RNF40-206ENST00000564260 NOLC1Q14978 699 aaKnown RBP eCLIP18.28■□□□□ 0.52
RNF40-206ENST00000564260 BMT2Q1RMZ1 405 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms