RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CAP1Q01518 475 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 ZNF484Q5JVG2 852 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 LRRC71Q8N4P6 559 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 TCP11Q8WWU5 503 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 LENG1Q96BZ8 264 aaPredicted RBP19.24■□□□□ 0.67
GDE1-203ENST00000564172 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 CFHR5Q9BXR6 569 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 LRRIQ4A6NIV6 560 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 TRPA1O75762 1119 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 CNGA1P29973 690 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 FXR1P51114 621 aaKnown RBP eCLIP19.24■□□□□ 0.67
GDE1-203ENST00000564172 TRIM14Q14142 442 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 FAM186BQ8IYM0 893 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 FRMD4BQ9Y2L6 1034 aa19.24■□□□□ 0.67
GDE1-203ENST00000564172 MGAMO43451 1857 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 ANKRD63C9JTQ0 380 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 EXOC3O60645 756 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 KLK7P49862 253 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 PRKCZQ05513 592 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 KCNH2Q12809 1159 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 CAPSQ13938 189 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 CCDC155Q8N6L0 562 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 DEPTORQ8TB45 409 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 PCIF1Q9H4Z3 704 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 RNF225M0QZC1 329 aaPredicted RBP19.23■□□□□ 0.67
GDE1-203ENST00000564172 MFAP3LO75121 409 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 SCP2P22307 547 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 ADSSP30520 456 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 MNAT1P51948 309 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 IGBP1P78318 339 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 PPP2R3AQ06190 1150 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 BRDTQ58F21 947 aaPredicted RBP19.23■□□□□ 0.67
GDE1-203ENST00000564172 PSPC1Q8WXF1 523 aaKnown RBP19.23■□□□□ 0.67
GDE1-203ENST00000564172 TRIB2Q92519 343 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 RNF186Q9NXI6 227 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 SIK3Q9Y2K2 1263 aa19.23■□□□□ 0.67
GDE1-203ENST00000564172 ZSWIM8A7E2V4 1837 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 IPO7O95373 1038 aaKnown RBP19.22■□□□□ 0.67
GDE1-203ENST00000564172 C22orf31O95567 290 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 VEGFBP49765 207 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 MXD4Q14582 209 aaPredicted RBP19.22■□□□□ 0.67
GDE1-203ENST00000564172 KIF22Q14807 665 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 EFCAB12Q6NXP0 572 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 CNGA4Q8IV77 575 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 ZBTB10Q96DT7 871 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 PCMTD1Q96MG8 357 aaPredicted RBP19.22■□□□□ 0.67
GDE1-203ENST00000564172 NUP58Q9BVL2 599 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 HSPBP1Q9NZL4 362 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 Q9Y3F1 56 aa19.22■□□□□ 0.67
GDE1-203ENST00000564172 TTC26A0AVF1 554 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 K7ERI5 159 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 LAMTOR4Q0VGL1 99 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 KCNMA1Q12791 1236 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 MFSD14CQ5VZR4 134 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 SLC39A4Q6P5W5 647 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 METTL13Q8N6R0 699 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 XXYLT1Q8NBI6 393 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 RDH13Q8NBN7 331 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 TRPV1Q8NER1 839 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 GIMAP7Q8NHV1 300 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 UBXN4Q92575 508 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 SLC35C1Q96A29 364 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 PAIP2Q9BPZ3 127 aaKnown RBP19.21■□□□□ 0.67
GDE1-203ENST00000564172 TTYH3Q9C0H2 523 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 SUCLA2Q9P2R7 463 aaPredicted RBP19.21■□□□□ 0.67
GDE1-203ENST00000564172 PCNTO95613 3336 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 COL1A2P08123 1366 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 NRDCO43847 1150 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 ADCY3O60266 1144 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
GDE1-203ENST00000564172 KLRC1P26715 233 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 DCAF17Q5H9S7 520 aaPredicted RBP19.21■□□□□ 0.67
GDE1-203ENST00000564172 TMEM139Q8IV31 216 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 RETREG2Q8NC44 543 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 PANX2Q96RD6 677 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 TMEM134Q9H6X4 195 aa19.21■□□□□ 0.67
GDE1-203ENST00000564172 HNRNPDLO14979 420 aaKnown RBP19.2■□□□□ 0.66
GDE1-203ENST00000564172 MAGEB2O15479 319 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 AFPP02771 609 aaKnown RBP19.2■□□□□ 0.66
GDE1-203ENST00000564172 AKR1A1P14550 325 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 CLCN3P51790 818 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 HTRA3P83110 453 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 STRN3Q13033 797 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 FIGNQ5HY92 759 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 TCERG1LQ5VWI1 586 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 AP5M1Q9H0R1 490 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 CAPN11Q9UMQ6 739 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 CYBAP13498 195 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 KRT9P35527 623 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 RHPN2Q8IUC4 686 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 CCAR2Q8N163 923 aaKnown RBP19.2■□□□□ 0.66
GDE1-203ENST00000564172 RNF149Q8NC42 400 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 ZSWIM2Q8NEG5 633 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 BICD1Q96G01 975 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 BAG1Q99933 345 aaPredicted RBP19.2■□□□□ 0.66
GDE1-203ENST00000564172 MMRN2Q9H8L6 949 aa19.2■□□□□ 0.66
GDE1-203ENST00000564172 F2P00734 622 aa19.19■□□□□ 0.66
GDE1-203ENST00000564172 SRGAP2CP0DJJ0 459 aa19.19■□□□□ 0.66
GDE1-203ENST00000564172 CPT1AP50416 773 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms