RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 TRMT10CQ7L0Y3 403 aaKnown RBP13.45□□□□□ -0.26
COMMD4-209ENST00000564068 TATDN2Q93075 761 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 RBM15Q96T37 977 aaKnown RBP eCLIP13.45□□□□□ -0.26
COMMD4-209ENST00000564068 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 FAM47DPA6NHR8 397 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 ALDH5A1P51649 535 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-209ENST00000564068 MRPS35P82673 323 aaKnown RBP13.45□□□□□ -0.26
COMMD4-209ENST00000564068 PDIA2Q13087 525 aaKnown RBP13.45□□□□□ -0.26
COMMD4-209ENST00000564068 MAP3K21Q5TCX8 1036 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 ZFATQ9P243 1243 aa13.45□□□□□ -0.26
COMMD4-209ENST00000564068 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 SHOX2O60902 331 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 GNAT1P11488 350 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 NCF2P19878 526 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 RFC1P35251 1148 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PGM1P36871 562 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 BPIFB4P59827 614 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 KDSRQ06136 332 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 BRDTQ58F21 947 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 COL23A1Q86Y22 540 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 NDC80O14777 642 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ZNF263O14978 683 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 SSTR3P32745 418 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PIK3CAP42336 1068 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PDE1BQ01064 536 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ANKMY2Q8IV38 441 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ADAM22Q9P0K1 906 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 STAM2O75886 525 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 GSTA1P08263 222 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 TPD52P55327 224 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PEX3P56589 373 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 KCNJ2P63252 427 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 CUL3Q13618 768 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 EAPPQ56P03 285 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 GLIS3Q8NEA6 775 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 MTRQ99707 1265 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 MRPL47Q9HD33 250 aaKnown RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 SPECC1L-ADORA2AF8WAN1 911 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PI4K2BG5E9Z4 385 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 TMEM253P0C7T8 217 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PON1P27169 355 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 CPA2P48052 419 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 FMO5P49326 533 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 CASP4P49662 377 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 NR1H3Q13133 447 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 DMP1Q13316 513 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 DBN1Q16643 649 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 EDRF1Q3B7T1 1238 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 RFX6Q8HWS3 928 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 TMEM206Q9H813 350 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 PAPOLBQ9NRJ5 636 aaKnown RBP13.44□□□□□ -0.26
COMMD4-209ENST00000564068 KLHL11Q9NVR0 708 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 ANKFY1Q9P2R3 1169 aa13.44□□□□□ -0.26
COMMD4-209ENST00000564068 CFLARO15519 480 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 RNF8O76064 485 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ZWINTO95229 277 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 GHRP10912 638 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 SAT1P21673 171 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
COMMD4-209ENST00000564068 CAV1Q03135 178 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 OVGP1Q12889 678 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 STAT4Q14765 748 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 CYP4F11Q9HBI6 524 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 NDE1Q9NXR1 346 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 CCDC195A0A1B0GUA6 201 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 H0YIN7 160 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ALAS1P13196 640 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 MARK3P27448 753 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ITGA8P53708 1063 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 IL17AQ16552 155 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 GEN1Q17RS7 908 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ACCSLQ4AC99 568 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ZNF394Q53GI3 561 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 RCSD1Q6JBY9 416 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 JDP2Q8WYK2 163 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ATG4AQ8WYN0 398 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 CFAP36Q96G28 342 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 APEX2Q9UBZ4 518 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 PXDNQ92626 1479 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 VAMP7P51809 220 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 MIIPQ5JXC2 388 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 RGS9BPQ6ZS82 235 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-209ENST00000564068 XXYLT1Q8NBI6 393 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ATL2Q8NHH9 583 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms