RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
LCMT1-204ENST00000564011 GMEB2Q9UKD1 530 aa11.69□□□□□ -0.54
LCMT1-204ENST00000564011 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
LCMT1-204ENST00000564011 EP300Q09472 2414 aaPredicted RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 IGKV6-21A0A0C4DH24 114 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 KRBA1A5PL33 1030 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 MSH4O15457 936 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 ZNF862O60290 1169 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 FOXD2O60548 495 aaPredicted RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 DCNP07585 359 aaKnown RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 HNRNPA1P09651 372 aaKnown RBP eCLIP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 FSHRP23945 695 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 NLRP5P59047 1200 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 STARD6P59095 220 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 DSG1Q02413 1049 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 TARBP2Q15633 366 aaKnown RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 RSPO4Q2I0M5 234 aaPredicted RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 NOTUMQ6P988 496 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 SLC5A5Q92911 643 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 NAP1L4Q99733 375 aaKnown RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 RNF26Q9BY78 433 aaPredicted RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 FAM126AQ9BYI3 521 aaPredicted RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 PRKD2Q9BZL6 878 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 RXFP1Q9HBX9 757 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 SH3GLB2Q9NR46 395 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 FNIP2Q9P278 1114 aa11.68□□□□□ -0.54
LCMT1-204ENST00000564011 PRG3Q9Y2Y8 225 aaPredicted RBP11.68□□□□□ -0.54
LCMT1-204ENST00000564011 CHD6Q8TD26 2715 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 KANSL1LA0AUZ9 987 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 LILRB3O75022 631 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
LCMT1-204ENST00000564011 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
LCMT1-204ENST00000564011 NRLP54845 237 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 FUT2Q10981 343 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
LCMT1-204ENST00000564011 Q4G0T1 1027 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 PPP4R3AQ6IN85 833 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
LCMT1-204ENST00000564011 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 ZNF280BQ86YH2 543 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 FAM177A1Q8N128 213 aaPredicted RBP11.67□□□□□ -0.54
LCMT1-204ENST00000564011 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 CEP170P1Q96L14 293 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 RTKNQ9BST9 563 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 UNC45AQ9H3U1 944 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 GIT1Q9Y2X7 761 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
LCMT1-204ENST00000564011 SF3B1O75533 1304 aaKnown RBP eCLIP11.66□□□□□ -0.545e-6■■■■■ 77.5
LCMT1-204ENST00000564011 TADA2AO75478 443 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 DDHD2O94830 711 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 ELAVL2Q12926 359 aaKnown RBP11.66□□□□□ -0.54
LCMT1-204ENST00000564011 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 PPM1LQ5SGD2 360 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 RTL10Q7L3V2 364 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 PALB2Q86YC2 1186 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 BCL7CQ8WUZ0 217 aaPredicted RBP11.66□□□□□ -0.54
LCMT1-204ENST00000564011 IER2Q9BTL4 223 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 ZSCAN32Q9NX65 697 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 CDH7Q9ULB5 785 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 BRPF3Q9ULD4 1205 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 ZMYM2Q9UBW7 1377 aa11.66□□□□□ -0.54
LCMT1-204ENST00000564011 CEP250Q9BV73 2442 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 ANHXE9PGG2 379 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 TGM5O43548 720 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 ZMYND10O75800 440 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 PSMD10O75832 226 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 P4HBP07237 508 aaKnown RBP11.65□□□□□ -0.54
LCMT1-204ENST00000564011 XBP1P17861 261 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 CDC27P30260 824 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
LCMT1-204ENST00000564011 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
LCMT1-204ENST00000564011 HTR4Q13639 388 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 MLF2Q15773 248 aaPredicted RBP11.65□□□□□ -0.54
LCMT1-204ENST00000564011 UGCGQ16739 394 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 TSGA10IPQ3SY00 556 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 FUT10Q6P4F1 479 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 COLGALT2Q8IYK4 626 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 TBCKQ8TEA7 893 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 DDX1Q92499 740 aaKnown RBP11.65□□□□□ -0.54
LCMT1-204ENST00000564011 MYADMQ96S97 322 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 PHF20Q9BVI0 1012 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 ADAM28Q9UKQ2 775 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 USP18Q9UMW8 372 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 IPPQ9Y573 584 aa11.65□□□□□ -0.54
LCMT1-204ENST00000564011 TPRP12270 2363 aaKnown RBP11.64□□□□□ -0.55
LCMT1-204ENST00000564011 ACACBO00763 2458 aa11.64□□□□□ -0.55
LCMT1-204ENST00000564011 ARL5CA6NH57 179 aa11.64□□□□□ -0.55
LCMT1-204ENST00000564011 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
LCMT1-204ENST00000564011 CPLX1O14810 134 aa11.64□□□□□ -0.55
LCMT1-204ENST00000564011 RFPL2O75678 378 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms