RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GPC4O75487 556 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 TMPRSS6Q8IU80 811 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 APBB2Q92870 758 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 PAIP1Q9H074 479 aaKnown RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 NPHS2Q9NP85 383 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 GDF3Q9NR23 364 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 PSMC3IPQ9P2W1 217 aaPredicted RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 HERC5Q9UII4 1024 aaKnown RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 KLHL20Q9Y2M5 609 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 PNMA8CA0A1B0GUJ8 204 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 DAPK3O43293 454 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 LDHAP00338 332 aaKnown RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 PRLP01236 227 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ITIH2P19823 946 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 BFSP1Q12934 665 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 TRIP13Q15645 432 aaPredicted RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 TNNI3KQ59H18 835 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 CATSPER3Q86XQ3 398 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ZNF444Q8N0Y2 327 aaPredicted RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 LRRN4CLQ8ND94 238 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 FBXO2Q9UK22 296 aaPredicted RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 EXOC7Q9UPT5 735 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 SLC4A4Q9Y6R1 1079 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 FPGT-TNNI3KV9GXZ4 949 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 H3BRJ5 948 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 GNGT2O14610 69 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ADCY6O43306 1168 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ZPR1O75312 459 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 MMP1P03956 469 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 YWHAGP61981 247 aaKnown RBP eCLIP6.63□□□□□ -1.35
CLK3-212ENST00000563418 LRRC14Q15048 493 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ZNF555Q8NEP9 628 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 OR9Q1Q8NGQ5 310 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 CLIC6Q96NY7 704 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 THTPAQ9BU02 230 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 FANCEQ9HB96 536 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 HAO1Q9UJM8 370 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 PCDH11YQ9BZA8 1340 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ARHGEF11O15085 1522 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 DDHD2O94830 711 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 TTMPQ5BVD1 217 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 OTUD7BQ6GQQ9 843 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 STX12Q86Y82 276 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 HIPK4Q8NE63 616 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ASAP3Q8TDY4 903 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 C14orf93Q9H972 538 aaKnown RBP6.63□□□□□ -1.35
CLK3-212ENST00000563418 KIF1BO60333 1816 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 AP5Z1O43299 807 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 GYPCP04921 128 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 ARHGDIAP52565 204 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 USP4Q13107 963 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 EFHC1Q5JVL4 640 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 CABP7Q86V35 215 aa6.63□□□□□ -1.35
CLK3-212ENST00000563418 DDX42Q86XP3 938 aaKnown RBP eCLIP6.63□□□□□ -1.35
CLK3-212ENST00000563418 B2RBV5 119 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RAD51CO43502 376 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 WDR47O94967 919 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 CLCN2P51788 898 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RCAN1P53805 252 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SLC45A4Q5BKX6 768 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 MLXIPQ9HAP2 919 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SLC12A4Q9UP95 1085 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 A0A0D9SFI3 127 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 MYL6BP14649 208 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ADSLP30566 484 aaPredicted RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 VCPP55072 806 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 ALKBH5Q6P6C2 394 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 NEK10Q6ZWH5 1172 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SPICE1Q8N0Z3 855 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 BTBD6Q96KE9 485 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RNF26Q9BY78 433 aaPredicted RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 TAGLN3Q9UI15 199 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SNX24Q9Y343 169 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 FAM83GA6ND36 823 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RGL2O15211 777 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 TAF5LO75529 589 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ENO1P06733 434 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 PORP16435 677 aaPredicted RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 ZNF844Q08AG5 666 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 MORF4L2Q15014 288 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ACAP2Q15057 778 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 PYROXD1Q8WU10 500 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 DDX47Q9H0S4 455 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 WNT8AQ9H1J5 351 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 NMRK1Q9NWW6 199 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 WDR62O43379 1518 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 KPNA7A9QM74 516 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SOX6P35712 828 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 NR1D2Q14995 579 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 MTFR1Q15390 333 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RUNDC3AQ59EK9 446 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RBM20Q5T481 1227 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 ACTRT1Q8TDG2 376 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RBM17Q96I25 401 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 MYD88Q99836 296 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ERP44Q9BS26 406 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 SORCS3Q9UPU3 1222 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 STARD13Q9Y3M8 1113 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms