RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 MTCL1Q9Y4B5 1905 aaKnown RBP23.33■■□□□ 1.32
CHD9-208ENST00000563410 NEMFO60524 1076 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 DGAT1O75907 488 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 SSBP05455 408 aaKnown RBP eCLIP23.32■■□□□ 1.32
CHD9-208ENST00000563410 ARL2P36404 184 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 TXKP42681 527 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 RARRES1P49788 294 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 FOSBP53539 338 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 MBTD1Q05BQ5 628 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 NOTUMQ6P988 496 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 ZBTB33Q86T24 672 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 COLGALT2Q8IYK4 626 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 KREMEN2Q8NCW0 462 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 UBN1Q9NPG3 1134 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 MARCH5Q9NX47 278 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 MIOSQ9NXC5 875 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 PPP4R2Q9NY27 417 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 STK39Q9UEW8 545 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 HES2Q9Y543 173 aa23.32■■□□□ 1.32
CHD9-208ENST00000563410 ARL5CA6NH57 179 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 INO80B-WBP1J3KQ70 363 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 CNPP09543 421 aaKnown RBP23.31■■□□□ 1.32
CHD9-208ENST00000563410 GLRA2P23416 452 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 CLCN4P51793 760 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 VCPP55072 806 aaKnown RBP23.31■■□□□ 1.32
CHD9-208ENST00000563410 TFDP1Q14186 410 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 ATAT1Q5SQI0 421 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 CABP7Q86V35 215 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 PPFIBP1Q86W92 1011 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 CCDC51Q96ER9 411 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 CSRNP2Q9H175 543 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 SORCS3Q9UPU3 1222 aa23.31■■□□□ 1.32
CHD9-208ENST00000563410 USP34Q70CQ2 3546 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 A0A087WWV3 80 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 BRD1O95696 1058 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 EFEMP2O95967 443 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 PDGFBP01127 241 aaPredicted RBP23.3■■□□□ 1.32
CHD9-208ENST00000563410 SOD2P04179 222 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 ARF4P18085 180 aaPredicted RBP23.3■■□□□ 1.32
CHD9-208ENST00000563410 NEK4P51957 841 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 DSC1Q08554 894 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 TCF15Q12870 199 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 TMC5Q6UXY8 1006 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 TAS1R1Q7RTX1 841 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 RNF168Q8IYW5 571 aaPredicted RBP23.3■■□□□ 1.32
CHD9-208ENST00000563410 PIGOQ8TEQ8 1089 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 GAD1Q99259 594 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 PHOX2BQ99453 314 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 NFKBIZQ9BYH8 718 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 TMEM60Q9H2L4 133 aa23.3■■□□□ 1.32
CHD9-208ENST00000563410 POTEMA6NI47 508 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 SPATA31C1P0DKV0 1188 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 KLRC2P26717 231 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 MLH1P40692 756 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 ZDHHC14Q8IZN3 488 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 ZFP42Q96MM3 310 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 HERC2P3Q9BVR0 1158 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 EMILIN2Q9BXX0 1053 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 SMOC2Q9H3U7 446 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 SFXN1Q9H9B4 322 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 MRPL17Q9NRX2 175 aaKnown RBP23.29■■□□□ 1.32
CHD9-208ENST00000563410 DBR1Q9UK59 544 aaKnown RBP23.29■■□□□ 1.32
CHD9-208ENST00000563410 USTQ9Y2C2 406 aa23.29■■□□□ 1.32
CHD9-208ENST00000563410 PRG3Q9Y2Y8 225 aaPredicted RBP23.29■■□□□ 1.32
CHD9-208ENST00000563410 B4GALT5O43286 388 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 AVPR2P30518 371 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 OR1G1P47890 313 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 SCNN1GP51170 649 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 PTPN5P54829 565 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 MTMR3Q13615 1198 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 GPR149Q86SP6 731 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 UBALD2Q8IYN6 164 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 TDRD5Q8NAT2 981 aaKnown RBP23.28■■□□□ 1.32
CHD9-208ENST00000563410 PRRX2Q99811 253 aa23.28■■□□□ 1.32
CHD9-208ENST00000563410 POLR3FQ9H1D9 316 aaPredicted RBP23.28■■□□□ 1.32
CHD9-208ENST00000563410 NXF3Q9H4D5 531 aaKnown RBP23.28■■□□□ 1.32
CHD9-208ENST00000563410 F8W810 466 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 USO1O60763 962 aaKnown RBP23.27■■□□□ 1.32
CHD9-208ENST00000563410 SEC24BO95487 1268 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 ASGR2P07307 311 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 XRCC6P12956 609 aaKnown RBP eCLIP23.27■■□□□ 1.32
CHD9-208ENST00000563410 NCBP1Q09161 790 aaKnown RBP23.27■■□□□ 1.32
CHD9-208ENST00000563410 TRIM29Q14134 588 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 CDR2LQ86X02 465 aaPredicted RBP23.27■■□□□ 1.32
CHD9-208ENST00000563410 GSTCDQ8NEC7 633 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 APOL6Q9BWW8 343 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 LIMD1Q9UGP4 676 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 GIT1Q9Y2X7 761 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 DOCK8Q8NF50 2099 aa23.27■■□□□ 1.32
CHD9-208ENST00000563410 C2CD2LO14523 706 aa23.26■■□□□ 1.31
CHD9-208ENST00000563410 KIAA0319Q5VV43 1072 aa23.26■■□□□ 1.31
CHD9-208ENST00000563410 CATSPER3Q86XQ3 398 aa23.26■■□□□ 1.31
CHD9-208ENST00000563410 PLCD3Q8N3E9 789 aa23.26■■□□□ 1.31
CHD9-208ENST00000563410 CCDC43Q96MW1 224 aaKnown RBP23.26■■□□□ 1.31
CHD9-208ENST00000563410 RPS6KC1Q96S38 1066 aa23.26■■□□□ 1.31
CHD9-208ENST00000563410 GPRC5CQ9NQ84 441 aa23.26■■□□□ 1.31
CHD9-208ENST00000563410 MYO15AQ9UKN7 3530 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 A0A1B0GUA9 196 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 MED24O75448 989 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 URODP06132 367 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms