RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 HACE1Q8IYU2 909 aa21■□□□□ 0.95
TRADD-203ENST00000563348 DAW1Q8N136 415 aa21■□□□□ 0.95
TRADD-203ENST00000563348 EFHBQ8N7U6 833 aa21■□□□□ 0.95
TRADD-203ENST00000563348 SYT2Q8N9I0 419 aaPredicted RBP21■□□□□ 0.95
TRADD-203ENST00000563348 TMEM169Q96HH4 297 aa21■□□□□ 0.95
TRADD-203ENST00000563348 CDK5RAP3Q96JB5 506 aa21■□□□□ 0.95
TRADD-203ENST00000563348 PLIN2Q99541 437 aa21■□□□□ 0.95
TRADD-203ENST00000563348 GIT1Q9Y2X7 761 aa21■□□□□ 0.95
TRADD-203ENST00000563348 TTLL13PA6NNM8 815 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 LINC01565O15544 149 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 HIP1RO75146 1068 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 NPTXRO95502 500 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 PRKCBP05771 671 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 LONP1P36776 959 aaKnown RBP20.99■□□□□ 0.95
TRADD-203ENST00000563348 UBA7P41226 1012 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 DLX2Q07687 328 aaPredicted RBP20.99■□□□□ 0.95
TRADD-203ENST00000563348 PRPF4BQ13523 1007 aaKnown RBP20.99■□□□□ 0.95
TRADD-203ENST00000563348 TMC7Q7Z402 723 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 IGSF21Q96ID5 467 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 NECAB3Q96P71 396 aaPredicted RBP20.99■□□□□ 0.95
TRADD-203ENST00000563348 GAD1Q99259 594 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 TCF25Q9BQ70 676 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 KIFC3Q9BVG8 833 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 TIPINQ9BVW5 301 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 GBP3Q9H0R5 595 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 DNAJB4Q9UDY4 337 aa20.99■□□□□ 0.95
TRADD-203ENST00000563348 GRXCR2A6NFK2 248 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 ARL5CA6NH57 179 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 TNFRSF10AO00220 468 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 N4BP3O15049 544 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 STX6O43752 255 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 B4GALT3O60512 393 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 POMCP01189 267 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 ALDH2P05091 517 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 SSBP05455 408 aaKnown RBP eCLIP20.98■□□□□ 0.95
TRADD-203ENST00000563348 PLA2G4BP0C869 781 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 GUCY2CP25092 1073 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 NPTX2P47972 431 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 SLC11A1P49279 550 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 SLC12A3P55017 1021 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 PEX3P56589 373 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 GRIN1Q05586 938 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 MAPK7Q13164 816 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 PTPAQ15257 358 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 PTCRAQ6ISU1 281 aaPredicted RBP20.98■□□□□ 0.95
TRADD-203ENST00000563348 FAM173BQ6P4H8 233 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 TMEM173Q86WV6 379 aaPredicted RBP20.98■□□□□ 0.95
TRADD-203ENST00000563348 CALML4Q96GE6 196 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 DRC1Q96MC2 740 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 FAM193BQ96PV7 902 aaPredicted RBP20.98■□□□□ 0.95
TRADD-203ENST00000563348 CDCA3Q99618 268 aaPredicted RBP20.98■□□□□ 0.95
TRADD-203ENST00000563348 TMEM175Q9BSA9 504 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 APOL6Q9BWW8 343 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 NXF3Q9H4D5 531 aaKnown RBP20.98■□□□□ 0.95
TRADD-203ENST00000563348 PDZD7Q9H5P4 517 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 C17orf75Q9HAS0 396 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 ENTPD7Q9NQZ7 604 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 MIOSQ9NXC5 875 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 DAXXQ9UER7 740 aaPredicted RBP20.98■□□□□ 0.95
TRADD-203ENST00000563348 CLIC4Q9Y696 253 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 PLXNA4Q9HCM2 1894 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 ATG2AQ2TAZ0 1938 aa20.98■□□□□ 0.95
TRADD-203ENST00000563348 K7ERI5 159 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 PER2O15055 1255 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 LIG1P18858 919 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 AKAP5P24588 427 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 MLH1P40692 756 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 DUSP6Q16828 381 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 PLPP4Q5VZY2 271 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 MRPL43Q8N983 215 aaKnown RBP20.97■□□□□ 0.95
TRADD-203ENST00000563348 NTPCRQ9BSD7 190 aaKnown RBP20.97■□□□□ 0.95
TRADD-203ENST00000563348 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
TRADD-203ENST00000563348 KCND2Q9NZV8 630 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 KCNG1Q9UIX4 513 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 USP20Q9Y2K6 914 aa20.97■□□□□ 0.95
TRADD-203ENST00000563348 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
TRADD-203ENST00000563348 MUC3AQ02505 3323 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 CCDC169A6NNP5 214 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 HIDE1A8MVS5 230 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 TBX10O75333 385 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 EDN1P05305 212 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 DMP1Q13316 513 aaPredicted RBP20.96■□□□□ 0.95
TRADD-203ENST00000563348 TMEM132AQ24JP5 1023 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 NT5DC1Q5TFE4 455 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 DDX53Q86TM3 631 aaKnown RBP20.96■□□□□ 0.95
TRADD-203ENST00000563348 HSCBQ8IWL3 235 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 GSTCDQ8NEC7 633 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
TRADD-203ENST00000563348 ZFP42Q96MM3 310 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 TMEM134Q9H6X4 195 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 PARP2Q9UGN5 583 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 FAN1Q9Y2M0 1017 aa20.96■□□□□ 0.95
TRADD-203ENST00000563348 FSD2A1L4K1 749 aa20.95■□□□□ 0.94
TRADD-203ENST00000563348 SFI1A8K8P3 1242 aa20.95■□□□□ 0.94
TRADD-203ENST00000563348 IL9P15248 144 aa20.95■□□□□ 0.94
TRADD-203ENST00000563348 NDUFV1P49821 464 aa20.95■□□□□ 0.94
TRADD-203ENST00000563348 SCNN1GP51170 649 aa20.95■□□□□ 0.94
TRADD-203ENST00000563348 DSC1Q08554 894 aa20.95■□□□□ 0.94
TRADD-203ENST00000563348 SMC1AQ14683 1233 aaKnown RBP20.95■□□□□ 0.94
TRADD-203ENST00000563348 BMS1Q14692 1282 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms