RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
CDT1-202ENST00000562747 ATL3Q6DD88 541 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 C1orf186Q6ZWK4 172 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 ZBTB8OSQ8IWT0 167 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
CDT1-202ENST00000562747 LINC00301Q8NCQ3 95 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
CDT1-202ENST00000562747 BSNDQ8WZ55 320 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 PPP2R3CQ969Q6 453 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 MFSD14AQ96MC6 490 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 PLIN2Q99541 437 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 FAM105AQ9NUU6 356 aa18.3■□□□□ 0.52
CDT1-202ENST00000562747 TBKBP1A7MCY6 615 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 PER2O15055 1255 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 TSPAN1O60635 241 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 ZNF623O75123 536 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 PPP6R2O75170 966 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 YEATS4O95619 227 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 PLA2G4BP0C869 781 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 GUCY2CP25092 1073 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 CBX2Q14781 532 aaPredicted RBP18.29■□□□□ 0.52
CDT1-202ENST00000562747 AMHR2Q16671 573 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 TRIM67Q6ZTA4 783 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
CDT1-202ENST00000562747 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 RSPH1Q8WYR4 309 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 CCDC51Q96ER9 411 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 PRIMPOLQ96LW4 560 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 TMEM117Q9H0C3 514 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 C17orf75Q9HAS0 396 aa18.29■□□□□ 0.52
CDT1-202ENST00000562747 TMEM221A6NGB7 291 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 M0R296 226 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 SPTLC2O15270 562 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 HIP1RO75146 1068 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 SSBP05455 408 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDT1-202ENST00000562747 FGFR1P11362 822 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
CDT1-202ENST00000562747 PLCG1P19174 1290 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 TXLNAP40222 546 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 ERVFC1P60507 584 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 KARSQ15046 597 aaKnown RBP18.28■□□□□ 0.52
CDT1-202ENST00000562747 FAM187BQ17R55 369 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 IER5LQ5T953 404 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 NOTUMQ6P988 496 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 DEPTORQ8TB45 409 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 EPSTI1Q96J88 318 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 CLIC6Q96NY7 704 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 TLE6Q9H808 572 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 RNF19AQ9NV58 838 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 PRMT7Q9NVM4 692 aaPredicted RBP18.28■□□□□ 0.52
CDT1-202ENST00000562747 TFIP11Q9UBB9 837 aaKnown RBP18.28■□□□□ 0.52
CDT1-202ENST00000562747 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
CDT1-202ENST00000562747 FGF18O76093 207 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 BRD1O95696 1058 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 EFNA5P52803 228 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 ZXDAP98168 799 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 MAPK6Q16659 721 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 SPECC1Q5M775 1068 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 DAW1Q8N136 415 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 COLGALT1Q8NBJ5 622 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 RNF169Q8NCN4 708 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 CNNM3Q8NE01 707 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 RAD54LQ92698 747 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 PGBD4Q96DM1 585 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 CASD1Q96PB1 797 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 FZD8Q9H461 694 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 TLR9Q9NR96 1032 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 BLOC1S4Q9NUP1 217 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 KCNG1Q9UIX4 513 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 PCDHB2Q9Y5E7 798 aa18.27■□□□□ 0.52
CDT1-202ENST00000562747 FSCN2O14926 492 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 ARF4P18085 180 aaPredicted RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 MAPK7Q13164 816 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 CLLU1OSQ5K130 101 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 UBXN11Q5T124 520 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 SPOUT1Q5T280 376 aaKnown RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 BMP8AQ7Z5Y6 402 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 MRPL10Q7Z7H8 261 aaKnown RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 MICAL1Q8TDZ2 1067 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 LRRC15Q8TF66 581 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 SUSD6Q92537 303 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 LARP4BQ92615 738 aaKnown RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 CPB2Q96IY4 423 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 CCDC113Q9H0I3 377 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 CWH43Q9H720 699 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 TYW1Q9NV66 732 aaKnown RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 STK17AQ9UEE5 414 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 DAXXQ9UER7 740 aaPredicted RBP18.26■□□□□ 0.51
CDT1-202ENST00000562747 CFAP45Q9UL16 551 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 PCDHB12Q9Y5F1 795 aa18.26■□□□□ 0.51
CDT1-202ENST00000562747 PHLPP2Q6ZVD8 1323 aa18.25■□□□□ 0.51
CDT1-202ENST00000562747 CNTNAP2Q9UHC6 1331 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms