RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 CEP120Q8N960 986 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 KIAA0895Q8NCT3 520 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 ZSWIM2Q8NEG5 633 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 TOP1MTQ969P6 601 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 ACO2Q99798 780 aaKnown RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 C2orf40Q9H1Z8 148 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 C17orf75Q9HAS0 396 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 PTPRHQ9HD43 1115 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 OLFML3Q9NRN5 406 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 LARSQ9P2J5 1176 aaKnown RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 TBX20Q9UMR3 447 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 HES2Q9Y543 173 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 TSC2P49815 1807 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 GJB5O95377 273 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 RPN1P04843 607 aaKnown RBP10.76□□□□□ -0.69
CLK3-208ENST00000562626 FGFR1P11362 822 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 ATP2A2P16615 1042 aaKnown RBP10.76□□□□□ -0.69
CLK3-208ENST00000562626 GAP43P17677 238 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 PROZP22891 400 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 KCNJ6P48051 423 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 SARSP49591 514 aaKnown RBP10.76□□□□□ -0.69
CLK3-208ENST00000562626 EFNA5P52803 228 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 STK4Q13043 487 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 POSTNQ15063 836 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 SEZ6Q53EL9 994 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 CLLU1OSQ5K130 101 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 ECHDC2Q86YB7 292 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 CCDC65Q8IXS2 484 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 TMEM192Q8IY95 271 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 TMEM130Q8N3G9 435 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 KCNN1Q92952 543 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 GBP4Q96PP9 640 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 PYM1Q9BRP8 204 aaKnown RBP10.76□□□□□ -0.69
CLK3-208ENST00000562626 FTHL17Q9BXU8 183 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 PBX4Q9BYU1 374 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
CLK3-208ENST00000562626 ST6GALNAC4Q9H4F1 302 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 MRPL44Q9H9J2 332 aaKnown RBP10.76□□□□□ -0.69
CLK3-208ENST00000562626 SLC39A2Q9NP94 309 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 GDAQ9Y2T3 454 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 MYO7AQ13402 2215 aa10.76□□□□□ -0.69
CLK3-208ENST00000562626 A0A0U1RQF3 1178 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 B4GALT3O60512 393 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 GCNT3O95395 438 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 AMHP03971 560 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 LINC00271P0C7V0 271 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 SMTNP53814 917 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 HTRA4P83105 476 aaPredicted RBP10.75□□□□□ -0.69
CLK3-208ENST00000562626 AMPD3Q01432 767 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 CAMK4Q16566 473 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 FAM26FQ5R3K3 315 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 ZBTB41Q5SVQ8 909 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 ATF7IP2Q5U623 682 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 NOTUMQ6P988 496 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 AGMOQ6ZNB7 445 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 SLC24A5Q71RS6 500 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 ZBTB33Q86T24 672 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 MAP4K3Q8IVH8 894 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 SMYD4Q8IYR2 804 aaPredicted RBP10.75□□□□□ -0.69
CLK3-208ENST00000562626 RNF169Q8NCN4 708 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 SCFD1Q8WVM8 642 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 TRAIPQ9BWF2 469 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 CDT1Q9H211 546 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 CHST12Q9NRB3 414 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 SEL1LQ9UBV2 794 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 IPPQ9Y573 584 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 PCDHA5Q9Y5H7 936 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 TRANK1O15050 2925 aa10.75□□□□□ -0.69
CLK3-208ENST00000562626 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 REV3LO60673 3130 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 A0A1W2PPC1 479 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 FAM189A1O60320 539 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 KINO60870 393 aaKnown RBP10.74□□□□□ -0.69
CLK3-208ENST00000562626 EFCAB14O75071 495 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 DGKIO75912 1065 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 PIGRP01833 764 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 HARSP12081 509 aaKnown RBP10.74□□□□□ -0.69
CLK3-208ENST00000562626 ZSCAN20P17040 1043 aaPredicted RBP10.74□□□□□ -0.69
CLK3-208ENST00000562626 BMP6P22004 513 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 AKAP5P24588 427 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 ADSSP30520 456 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 AXLP30530 894 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 MCM4P33991 863 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 PAN2Q504Q3 1202 aaKnown RBP10.74□□□□□ -0.69
CLK3-208ENST00000562626 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
CLK3-208ENST00000562626 ISM2Q6H9L7 571 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 LRRC55Q6ZSA7 311 aa10.74□□□□□ -0.69
CLK3-208ENST00000562626 MRPL10Q7Z7H8 261 aaKnown RBP10.74□□□□□ -0.69
CLK3-208ENST00000562626 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms