RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LCA5Q86VQ0 697 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 TTC8Q8TAM2 541 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 TMEM237Q96Q45 408 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
GTF3C1-203ENST00000562609 SMARCA1P28370 1054 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 USP11P51784 963 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 ARID5AQ03989 594 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 PDE4DQ08499 809 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 IKQ13123 557 aaPredicted RBP15.06■□□□□ 0
GTF3C1-203ENST00000562609 CALCRLQ16602 461 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 SLFN13Q68D06 897 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 CDAN1Q8IWY9 1227 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 METTL13Q8N6R0 699 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 ENDOVQ8N8Q3 282 aaKnown RBP15.06■□□□□ 0
GTF3C1-203ENST00000562609 EPS8L3Q8TE67 593 aaKnown RBP15.06■□□□□ 0
GTF3C1-203ENST00000562609 SEC14L1Q92503 715 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 SLITRK6Q9H5Y7 841 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 MLXIPLQ9NP71 852 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 NMRK1Q9NWW6 199 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 CTNNAL1Q9UBT7 734 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 LRCH1Q9Y2L9 728 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 A0A087X0T9 212 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 TULP1O00294 542 aaPredicted RBP15.05■□□□□ 0
GTF3C1-203ENST00000562609 ZBTB5O15062 677 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 FAM228BP0C875 321 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 PARP6Q2NL67 630 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 QRICH1Q2TAL8 776 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 USH1GQ495M9 461 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 C6orf118Q5T5N4 469 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 RASIP1Q5U651 963 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 ANKLE1Q8NAG6 615 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 ATP8B4Q8TF62 1192 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 ZNF333Q96JL9 665 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 CSRNP1Q96S65 589 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 CCSER1Q9C0I3 900 aa15.05■□□□□ 0
GTF3C1-203ENST00000562609 DBR1Q9UK59 544 aaKnown RBP15.05■□□□□ 0
GTF3C1-203ENST00000562609 TLR2O60603 784 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 ENTPD5O75356 428 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 GH2P01242 217 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 AFPP02771 609 aaKnown RBP15.05■□□□□ -0
GTF3C1-203ENST00000562609 FCER1AP12319 257 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 MCL1Q07820 350 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 MGAT5Q09328 741 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 SPDYCQ5MJ68 293 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 VCX3BQ9H321 246 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 PSTPIP2Q9H939 334 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 VCX3AQ9NNX9 186 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 TXLNGQ9NUQ3 528 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 KLHL14Q9P2G3 628 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 ADAMTS1Q9UHI8 967 aa15.05■□□□□ -0
GTF3C1-203ENST00000562609 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 CETN3O15182 167 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 ATP9AO75110 1047 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 SERPING1P05155 500 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 UBAP2Q5T6F2 1119 aaKnown RBP15.04■□□□□ -0
GTF3C1-203ENST00000562609 SFMBT2Q5VUG0 894 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 SESTD1Q86VW0 696 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 PTPRN2Q92932 1015 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 IDI2Q9BXS1 227 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 DHX36Q9H2U1 1008 aaKnown RBP15.04■□□□□ -0
GTF3C1-203ENST00000562609 KBTBD4Q9NVX7 518 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 PRKAG3Q9UGI9 489 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 PCDHA1Q9Y5I3 950 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 SMCHD1A6NHR9 2005 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 F5H6K3 240 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 LAD1O00515 517 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 KLRC3Q07444 240 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 SLC18A3Q16572 532 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 MAN2A1Q16706 1144 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 ABCB5Q2M3G0 1257 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 GPATCH4Q5T3I0 446 aaKnown RBP15.04■□□□□ -0
GTF3C1-203ENST00000562609 DYMQ7RTS9 669 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 DAAM2Q86T65 1068 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 ZC3H18Q86VM9 953 aaKnown RBP15.04■□□□□ -0
GTF3C1-203ENST00000562609 CCDC17Q96LX7 622 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 ZNF510Q9Y2H8 683 aa15.04■□□□□ -0
GTF3C1-203ENST00000562609 ESYT2A0FGR8 921 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 PENKP01210 267 aaPredicted RBP15.03■□□□□ -0
GTF3C1-203ENST00000562609 PLTPP55058 493 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 ASIC1P78348 528 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 SFSWAPQ12872 951 aaKnown RBP15.03■□□□□ -0
GTF3C1-203ENST00000562609 ZC2HC1CQ53FD0 456 aaPredicted RBP15.03■□□□□ -0
GTF3C1-203ENST00000562609 TAOK1Q7L7X3 1001 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 ECHDC2Q86YB7 292 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 TIPINQ9BVW5 301 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 LRMDAQ9H2I8 198 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 KANSL2Q9H9L4 492 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 RHBDL2Q9NX52 303 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 TMCO1Q9UM00 188 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 SIPA1L1O43166 1804 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 OATP04181 439 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 SKIP12755 728 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 ECE1P42892 770 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 FAM47EQ6ZV65 393 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 OTUD6AQ7L8S5 288 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 VSIG1Q86XK7 387 aa15.03■□□□□ -0
GTF3C1-203ENST00000562609 AGGF1Q8N302 714 aaeCLIP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms