RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH13-206ENST00000562601 LLPHQ9BRT6 129 aaKnown RBP6.55□□□□□ -1.36
CDH13-206ENST00000562601 SEZ6LQ9BYH1 1024 aa6.55□□□□□ -1.36
CDH13-206ENST00000562601 AZI2Q9H6S1 392 aa6.55□□□□□ -1.36
CDH13-206ENST00000562601 DDX25Q9UHL0 483 aaKnown RBP6.55□□□□□ -1.36
CDH13-206ENST00000562601 GBF1Q92538 1859 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 TANC1Q9C0D5 1861 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 CYP3A7-CYP3A51PA0A087WV96 503 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 KIF28PB7ZC32 967 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 MARCH6O60337 910 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 GAS7O60861 476 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 CTSHP09668 335 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 CKBP12277 381 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 CPB1P15086 417 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 CYP3A7P24462 503 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 GJB2P29033 226 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 THPOP40225 353 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 FXR1P51114 621 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH13-206ENST00000562601 STAT5BP51692 787 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 SETQ01105 290 aaPredicted RBP6.54□□□□□ -1.36
CDH13-206ENST00000562601 HYAL2Q12891 473 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 PPFIA1Q13136 1202 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 PPIGQ13427 754 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH13-206ENST00000562601 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 GRIK4Q16099 956 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 Q4G0T1 1027 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 TMEM240Q5SV17 173 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 ZNF618Q5T7W0 954 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 LRCH2Q5VUJ6 765 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 MIS18BP1Q6P0N0 1132 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 OTOP2Q7RTS6 562 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 NEK8Q86SG6 692 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 CCDC60Q8IWA6 550 aaPredicted RBP6.54□□□□□ -1.36
CDH13-206ENST00000562601 LMBR1Q8WVP7 490 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 SLC5A5Q92911 643 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 VWCEQ96DN2 955 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 SPACA7Q96KW9 195 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 FTOQ9C0B1 505 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH13-206ENST00000562601 UNC45AQ9H3U1 944 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 SMARCAD1Q9H4L7 1026 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 BRMS1Q9HCU9 246 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 IL23AQ9NPF7 189 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 ZNF302Q9NR11 478 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 TBC1D22BQ9NU19 505 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 ERAP1Q9NZ08 941 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 GABBR1Q9UBS5 961 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 TCEAL9Q9UHQ7 104 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 ZNF215Q9UL58 517 aaPredicted RBP6.54□□□□□ -1.36
CDH13-206ENST00000562601 POLIQ9UNA4 740 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 LAMA3Q16787 3333 aa6.54□□□□□ -1.36
CDH13-206ENST00000562601 GRXCR1A8MXD5 290 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 ZBTB42B2RXF5 422 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 NDUFB5O43674 189 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 PSMD10O75832 226 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 FGBP02675 491 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 IQCF3P0C7M6 154 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 INSRRP14616 1297 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 HMGN5P82970 282 aaKnown RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 KCNA1Q09470 495 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 TMEM62Q0P6H9 643 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 BFSP2Q13515 415 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 GNL2Q13823 731 aaKnown RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 GPNMBQ14956 572 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 SAFBQ15424 915 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH13-206ENST00000562601 ZNF174Q15697 407 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 UGCGQ16739 394 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 TCTN1Q2MV58 587 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 TRIM71Q2Q1W2 868 aaKnown RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 PRRT3Q5FWE3 981 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 MARCH8Q5T0T0 291 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 FAM160B1Q5W0V3 765 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 FAM109BQ6ICB4 259 aaPredicted RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 ZNF746Q6NUN9 644 aaPredicted RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 PLPPR4Q7Z2D5 763 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 MIER3Q7Z3K6 550 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 SERINC5Q86VE9 423 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 CKAP2LQ8IYA6 745 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 ETNPPLQ8TBG4 499 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 NUDT8Q8WV74 236 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 TTC9Q92623 222 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 HAS1Q92839 578 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 PMEPA1Q969W9 287 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 RNPC3Q96LT9 517 aaKnown RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 MBOAT7Q96N66 472 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 TRAIPQ9BWF2 469 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 PLVAPQ9BX97 442 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 TEKT3Q9BXF9 490 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 OSBPL7Q9BZF2 842 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 FAM49AQ9H0Q0 323 aaPredicted RBP6.53□□□□□ -1.36
CDH13-206ENST00000562601 DISC1Q9NRI5 854 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 NAGPAQ9UK23 515 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 PCDHA10Q9Y5I2 948 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 SIP14410 1827 aa6.53□□□□□ -1.36
CDH13-206ENST00000562601 EMSYQ7Z589 1322 aa6.52□□□□□ -1.37
CDH13-206ENST00000562601 PTPRSQ13332 1948 aa6.52□□□□□ -1.37
CDH13-206ENST00000562601 IGKV6D-21A0A0A0MT36 114 aa6.52□□□□□ -1.37
CDH13-206ENST00000562601 A0A1W2PPC1 479 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms