RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 FIZ1Q96SL8 496 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 C17orf80Q9BSJ5 609 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 MRPL4Q9BYD3 311 aaKnown RBP18.39■□□□□ 0.53
CLK3-207ENST00000562389 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
CLK3-207ENST00000562389 ZHX3Q9H4I2 956 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 SEL1LQ9UBV2 794 aa18.39■□□□□ 0.53
CLK3-207ENST00000562389 MRPL42Q9Y6G3 142 aaKnown RBP18.39■□□□□ 0.53
CLK3-207ENST00000562389 A0A1B0GVL5 298 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 MEIS3P2A8K0S8 358 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 K7ENM7 598 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 NPTXRO95502 500 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 GAP43P17677 238 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 ABCD1P33897 745 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 STRN3Q13033 797 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 TMEM132AQ24JP5 1023 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 ATF7IP2Q5U623 682 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 CNNM4Q6P4Q7 775 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 AGMOQ6ZNB7 445 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 HAUS6Q7Z4H7 955 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 FAM178BQ8IXR5 827 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 TMEM192Q8IY95 271 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 HELQQ8TDG4 1101 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 ARNTL2Q8WYA1 636 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
CLK3-207ENST00000562389 ACO2Q99798 780 aaKnown RBP18.38■□□□□ 0.53
CLK3-207ENST00000562389 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 TRIM9Q9C026 710 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 PRDM12Q9H4Q4 367 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 CERS4Q9HA82 394 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 UBN1Q9NPG3 1134 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 USP25Q9UHP3 1055 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 TNFSF13BQ9Y275 285 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 USP20Q9Y2K6 914 aa18.38■□□□□ 0.53
CLK3-207ENST00000562389 MYO9BQ13459 2157 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 EPOPA6NHQ4 379 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 ACTN4O43707 911 aaKnown RBP18.37■□□□□ 0.53
CLK3-207ENST00000562389 DCAF4L1Q3SXM0 396 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 EPC2Q52LR7 807 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 EEF1DP3Q658K8 133 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 GLB1LQ6UWU2 654 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 SFR1Q86XK3 245 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 CEP57L1Q8IYX8 460 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 MRPS27Q92552 414 aaKnown RBP18.37■□□□□ 0.53
CLK3-207ENST00000562389 STAMQ92783 540 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 C7orf25Q9BPX7 421 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 MRPL9Q9BYD2 267 aaKnown RBP18.37■□□□□ 0.53
CLK3-207ENST00000562389 NXF3Q9H4D5 531 aaKnown RBP18.37■□□□□ 0.53
CLK3-207ENST00000562389 ST6GALNAC4Q9H4F1 302 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 RSAD1Q9HA92 442 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 ZMYM2Q9UBW7 1377 aa18.37■□□□□ 0.53
CLK3-207ENST00000562389 C5orf67F2Z3F1 127 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 OFD1O75665 1012 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 SLFN14P0C7P3 912 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 ITGA4P13612 1032 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 IDEP14735 1019 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 BMPR1AP36894 532 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 GTF2BQ00403 316 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 LONRF3Q496Y0 759 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 APBB1IPQ7Z5R6 666 aaPredicted RBP18.36■□□□□ 0.53
CLK3-207ENST00000562389 FSIP1Q8NA03 581 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 FBXO22Q8NEZ5 403 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 MYLIPQ8WY64 445 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 TARS2Q9BW92 718 aaKnown RBP18.36■□□□□ 0.53
CLK3-207ENST00000562389 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 CWH43Q9H720 699 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 PTPRHQ9HD43 1115 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 OLFML3Q9NRN5 406 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 PANK4Q9NVE7 773 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 SERTAD1Q9UHV2 236 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 MTUS1Q9ULD2 1270 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 TBX20Q9UMR3 447 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 HES2Q9Y543 173 aa18.36■□□□□ 0.53
CLK3-207ENST00000562389 TDRD15B5MCY1 1934 aaKnown RBP18.35■□□□□ 0.53
CLK3-207ENST00000562389 INPPL1O15357 1258 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 RB1P06400 928 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 PROZP22891 400 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 NMT1P30419 496 aaKnown RBP18.35■□□□□ 0.53
CLK3-207ENST00000562389 CTNNB1P35222 781 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 SYKP43405 635 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 NDUFA8P51970 172 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 NOMO2Q5JPE7 1267 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 ZPBP2Q6X784 338 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 LRRC55Q6ZSA7 311 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 ZNF720Q7Z2F6 126 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 CCDC65Q8IXS2 484 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 HVCN1Q96D96 273 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 GAS2L1Q99501 681 aaPredicted RBP18.35■□□□□ 0.53
CLK3-207ENST00000562389 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 GOLPH3LQ9H4A5 285 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
CLK3-207ENST00000562389 GIT1Q9Y2X7 761 aa18.35■□□□□ 0.53
CLK3-207ENST00000562389 CDH23Q9H251 3354 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 ABLIM1O14639 778 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 PPP1R37O75864 691 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 PIGRP01833 764 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 LAG3P18627 525 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 ASIC1P78348 528 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms