RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GCDHQ92947 438 aaPredicted RBP8.18□□□□□ -1.1
SMG1-204ENST00000561940 NKD2Q969F2 451 aaPredicted RBP8.18□□□□□ -1.1
SMG1-204ENST00000561940 TMEM176AQ96HP8 235 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 PLA2G12BQ9BX93 195 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 CD248Q9HCU0 757 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMG1-204ENST00000561940 GEMIN8Q9NWZ8 242 aaKnown RBP8.18□□□□□ -1.1
SMG1-204ENST00000561940 SYNPO2Q9UMS6 1093 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 VWA7Q9Y334 891 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 PCDHB6Q9Y5E3 794 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 PATE3B3GLJ2 98 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 KIF3BO15066 747 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 MTHFD2P13995 350 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 CYP2C19P33261 490 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 KIF23Q02241 960 aaPredicted RBP8.17□□□□□ -1.1
SMG1-204ENST00000561940 SPIDRQ14159 915 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 ZNF267Q14586 743 aaPredicted RBP8.17□□□□□ -1.1
SMG1-204ENST00000561940 RRP12Q5JTH9 1297 aaKnown RBP8.17□□□□□ -1.1
SMG1-204ENST00000561940 DNERQ8NFT8 737 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 OR14C36Q8NHC7 312 aa8.17□□□□□ -1.1
SMG1-204ENST00000561940 GFM2Q969S9 779 aaKnown RBP8.17□□□□□ -1.1
SMG1-204ENST00000561940 NUP88Q99567 741 aaPredicted RBP8.17□□□□□ -1.1
SMG1-204ENST00000561940 AGO3Q9H9G7 860 aaKnown RBP8.17□□□□□ -1.1
SMG1-204ENST00000561940 A0A0A6YYK5 440 aaPredicted RBP8.16□□□□□ -1.1
SMG1-204ENST00000561940 ADRB1P08588 477 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 SLC5A3P53794 718 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 BPIFB4P59827 614 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 GFOD2Q3B7J2 385 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 GPR135Q8IZ08 494 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 ANKRD53Q8N9V6 530 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 SHCBP1Q8NEM2 672 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 GAB3Q8WWW8 586 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 SSH1Q8WYL5 1049 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 AIFM3Q96NN9 605 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 GPR20Q99678 358 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 FDXACB1Q9BRP7 624 aaPredicted RBP8.16□□□□□ -1.1
SMG1-204ENST00000561940 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 ACE2Q9BYF1 805 aaPredicted RBP8.16□□□□□ -1.1
SMG1-204ENST00000561940 DMRT3Q9NQL9 472 aa8.16□□□□□ -1.1
SMG1-204ENST00000561940 GOLGA6CA6NDK9 693 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 GOLGA6BA6NDN3 693 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 MAFGO15525 162 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 DAPK3O43293 454 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 GOLGA6DP0CG33 693 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 ZNF20P17024 532 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 ADCY7P51828 1080 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 ADKP55263 362 aaKnown RBP8.15□□□□□ -1.1
SMG1-204ENST00000561940 SESN2P58004 480 aaPredicted RBP8.15□□□□□ -1.1
SMG1-204ENST00000561940 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG1-204ENST00000561940 IFIT1BQ5T764 474 aaKnown RBP8.15□□□□□ -1.1
SMG1-204ENST00000561940 THEMISQ8N1K5 641 aaPredicted RBP8.15□□□□□ -1.1
SMG1-204ENST00000561940 MIER2Q8N344 545 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 KRTAP17-1Q9BYP8 105 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.1
SMG1-204ENST00000561940 KLC2Q9H0B6 622 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 CSRNP2Q9H175 543 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 SLC12A5Q9H2X9 1139 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 OBP2AQ9NY56 170 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 GOLGA6AQ9NYA3 693 aa8.15□□□□□ -1.1
SMG1-204ENST00000561940 SLC26A4O43511 780 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 INSRRP14616 1297 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 DUSP8Q13202 625 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 GTF2H3Q13889 308 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 UAP1L1Q3KQV9 507 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 MINDY4Q4G0A6 757 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 B3GNT9Q6UX72 402 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 TTC9BQ8N6N2 239 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 PLA2G15Q8NCC3 412 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 DVL3Q92997 716 aaPredicted RBP8.14□□□□□ -1.11
SMG1-204ENST00000561940 COA7Q96BR5 231 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 TIFAQ96CG3 184 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 SLC7A6OSQ96CW6 309 aaPredicted RBP8.14□□□□□ -1.11
SMG1-204ENST00000561940 HIST1H2AHQ96KK5 128 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 HIST1H2AJQ99878 128 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 HAPLN2Q9GZV7 340 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 NCDNQ9UBB6 729 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 DDX20Q9UHI6 824 aaKnown RBP8.14□□□□□ -1.11
SMG1-204ENST00000561940 TCAF1Q9Y4C2 921 aa8.14□□□□□ -1.11
SMG1-204ENST00000561940 AP1G1O43747 822 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 RAD17O75943 681 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 MYBP10242 640 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 MSX2P35548 267 aaPredicted RBP8.13□□□□□ -1.11
SMG1-204ENST00000561940 RIN1Q13671 783 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 GRM7Q14831 915 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 ADRM1Q16186 407 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 MAP9Q49MG5 647 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 KRT40Q6A162 431 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 SLC4A10Q6U841 1118 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 CLEC14AQ86T13 490 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 SLC6A15Q9H2J7 730 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 NMRK2Q9NPI5 230 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 PLA2G3Q9NZ20 509 aa8.13□□□□□ -1.11
SMG1-204ENST00000561940 SEC24DO94855 1032 aaPredicted RBP8.12□□□□□ -1.11
SMG1-204ENST00000561940 VCAM1P19320 739 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 CD69Q07108 199 aa8.12□□□□□ -1.11
SMG1-204ENST00000561940 FOXL1Q12952 345 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms