RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SYT2Q8N9I0 419 aaPredicted RBP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 TRIM6Q9C030 488 aaPredicted RBP17.09■□□□□ 0.33
CCDC113-203ENST00000561517 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 GIT1Q9Y2X7 761 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 HES2Q9Y543 173 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 CLIC4Q9Y696 253 aa17.09■□□□□ 0.33
CCDC113-203ENST00000561517 ZMYM2Q9UBW7 1377 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 NT5C1B-RDH14C9J2C7 533 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 N4BP3O15049 544 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 STX6O43752 255 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 DDHD2O94830 711 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 NPTXRO95502 500 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 EDN1P05305 212 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 SLC12A3P55017 1021 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
CCDC113-203ENST00000561517 HSCBQ8IWL3 235 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 HACE1Q8IYU2 909 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 EFHBQ8N7U6 833 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 IGSF21Q96ID5 467 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 UHRF1Q96T88 793 aaPredicted RBP17.08■□□□□ 0.32
CCDC113-203ENST00000561517 PLIN2Q99541 437 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 KIFC3Q9BVG8 833 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 NXF3Q9H4D5 531 aaKnown RBP17.08■□□□□ 0.32
CCDC113-203ENST00000561517 ZSCAN16Q9H4T2 348 aaPredicted RBP17.08■□□□□ 0.32
CCDC113-203ENST00000561517 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 IGFLR1Q9H665 355 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 NGRNQ9NPE2 291 aaKnown RBP17.08■□□□□ 0.32
CCDC113-203ENST00000561517 KCND2Q9NZV8 630 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
CCDC113-203ENST00000561517 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 CITO14578 2027 aa17.08■□□□□ 0.32
CCDC113-203ENST00000561517 ARL5CA6NH57 179 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 H3BQ06 376 aaPredicted RBP17.07■□□□□ 0.32
CCDC113-203ENST00000561517 LINC01565O15544 149 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 PLA2G4BP0C869 781 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 UBA7P41226 1012 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 NPTX2P47972 431 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 NRIP1P48552 1158 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 SLC11A1P49279 550 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 DLX2Q07687 328 aaPredicted RBP17.07■□□□□ 0.32
CCDC113-203ENST00000561517 PUS10Q3MIT2 529 aaKnown RBP17.07■□□□□ 0.32
CCDC113-203ENST00000561517 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM173Q86WV6 379 aaPredicted RBP17.07■□□□□ 0.32
CCDC113-203ENST00000561517 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM169Q96HH4 297 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 GAD1Q99259 594 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 CDCA3Q99618 268 aaPredicted RBP17.07■□□□□ 0.32
CCDC113-203ENST00000561517 TCF25Q9BQ70 676 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 GBP3Q9H0R5 595 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 TLE6Q9H808 572 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 ARHGAP28Q9P2N2 729 aa17.07■□□□□ 0.32
CCDC113-203ENST00000561517 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
CCDC113-203ENST00000561517 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 GRXCR2A6NFK2 248 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 TBX10O75333 385 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 POMCP01189 267 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 MLH1P40692 756 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 PEX3P56589 373 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 DSC1Q08554 894 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 DUSP6Q16828 381 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 PLPP4Q5VZY2 271 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 DDX53Q86TM3 631 aaKnown RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 RBM23Q86U06 439 aaKnown RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 GSTCDQ8NEC7 633 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 BCL7CQ8WUZ0 217 aaPredicted RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 FAM193BQ96PV7 902 aaPredicted RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 CCSER1Q9C0I3 900 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 ENTPD7Q9NQZ7 604 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 MIOSQ9NXC5 875 aa17.06■□□□□ 0.32
CCDC113-203ENST00000561517 RBM19Q9Y4C8 960 aaKnown RBP17.06■□□□□ 0.32
CCDC113-203ENST00000561517 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 CCDC169A6NNP5 214 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 K7ERI5 159 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 TNFRSF10AO00220 468 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 GLP2RO95838 553 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 ALDH2P05091 517 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 LIG1P18858 919 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 AKAP5P24588 427 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 SCNN1GP51170 649 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 TAS1R3Q7RTX0 852 aa17.05■□□□□ 0.32
CCDC113-203ENST00000561517 TMC7Q7Z402 723 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms