RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 BTN2A2Q8WVV5 523 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 EDAQ92838 391 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 NKD2Q969F2 451 aaPredicted RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 SPATA9Q9BWV2 254 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 UPF3BQ9BZI7 483 aaKnown RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 UBE2ZQ9H832 354 aaPredicted RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 ALG13Q9NP73 1137 aaKnown RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 PRR13Q9NZ81 148 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 EMC9Q9Y3B6 208 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 KCTD3Q9Y597 815 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 CHD9Q3L8U1 2897 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 PLXNA3P51805 1871 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 MYBBP1AQ9BQG0 1328 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
SPG11-225ENST00000561391 ADAMTS20P59510 1910 aa4□□□□□ -1.77
SPG11-225ENST00000561391 CHD6Q8TD26 2715 aa4□□□□□ -1.77
SPG11-225ENST00000561391 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4□□□□□ -1.77
SPG11-225ENST00000561391 TRIM75PA6NK02 468 aa4□□□□□ -1.77
SPG11-225ENST00000561391 CYSRT1A8MQ03 144 aa4□□□□□ -1.77
SPG11-225ENST00000561391 FGBP02675 491 aa4□□□□□ -1.77
SPG11-225ENST00000561391 FAM153BP0C7A2 387 aa4□□□□□ -1.77
SPG11-225ENST00000561391 SLC5A1P13866 664 aa4□□□□□ -1.77
SPG11-225ENST00000561391 IFNGR1P15260 489 aa4□□□□□ -1.77
SPG11-225ENST00000561391 AVPR2P30518 371 aa4□□□□□ -1.77
SPG11-225ENST00000561391 ECI1P42126 302 aa4□□□□□ -1.77
SPG11-225ENST00000561391 GRIA2P42262 883 aa4□□□□□ -1.77
SPG11-225ENST00000561391 EIF4A1P60842 406 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 PPP2R2AP63151 447 aa4□□□□□ -1.77
SPG11-225ENST00000561391 GRB10Q13322 594 aa4□□□□□ -1.77
SPG11-225ENST00000561391 SNX17Q15036 470 aa4□□□□□ -1.77
SPG11-225ENST00000561391 SF1Q15637 639 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 GAB4Q2WGN9 574 aa4□□□□□ -1.77
SPG11-225ENST00000561391 CCDC152Q4G0S7 254 aa4□□□□□ -1.77
SPG11-225ENST00000561391 TREML2Q5T2D2 321 aa4□□□□□ -1.77
SPG11-225ENST00000561391 YOD1Q5VVQ6 348 aaPredicted RBP4□□□□□ -1.77
SPG11-225ENST00000561391 MFSD14CQ5VZR4 134 aa4□□□□□ -1.77
SPG11-225ENST00000561391 GTF2IRD2BQ6EKJ0 949 aa4□□□□□ -1.77
SPG11-225ENST00000561391 MFSD5Q6N075 450 aa4□□□□□ -1.77
SPG11-225ENST00000561391 ZPBP2Q6X784 338 aa4□□□□□ -1.77
SPG11-225ENST00000561391 RNF111Q6ZNA4 994 aa4□□□□□ -1.77
SPG11-225ENST00000561391 EP400NLQ6ZTU2 488 aa4□□□□□ -1.77
SPG11-225ENST00000561391 OTOP2Q7RTS6 562 aa4□□□□□ -1.77
SPG11-225ENST00000561391 FRMD5Q7Z6J6 570 aa4□□□□□ -1.77
SPG11-225ENST00000561391 NOP9Q86U38 636 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 GTF2IRD2Q86UP8 949 aa4□□□□□ -1.77
SPG11-225ENST00000561391 TRIM59Q8IWR1 403 aa4□□□□□ -1.77
SPG11-225ENST00000561391 HOOK2Q96ED9 719 aa4□□□□□ -1.77
SPG11-225ENST00000561391 FCRL3Q96P31 734 aaPredicted RBP4□□□□□ -1.77
SPG11-225ENST00000561391 IPO9Q96P70 1041 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 CDC6Q99741 560 aa4□□□□□ -1.77
SPG11-225ENST00000561391 ADAMTS10Q9H324 1103 aa4□□□□□ -1.77
SPG11-225ENST00000561391 PRKRIP1Q9H875 184 aaPredicted RBP4□□□□□ -1.77
SPG11-225ENST00000561391 GPRC5CQ9NQ84 441 aa4□□□□□ -1.77
SPG11-225ENST00000561391 AP5S1Q9NUS5 200 aa4□□□□□ -1.77
SPG11-225ENST00000561391 FLRT1Q9NZU1 646 aa4□□□□□ -1.77
SPG11-225ENST00000561391 SLC45A1Q9Y2W3 748 aa4□□□□□ -1.77
SPG11-225ENST00000561391 MRPL42Q9Y6G3 142 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 TPRP12270 2363 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 SETXQ7Z333 2677 aaKnown RBP4□□□□□ -1.77
SPG11-225ENST00000561391 A0A0G2JMZ2 1700 aa4□□□□□ -1.77
SPG11-225ENST00000561391 RLFQ13129 1914 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 ZNF536O15090 1300 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 TRAV20A0A0B4J274 112 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 MYOCOSA0A1B0GUC4 107 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 C2orf71A6NGG8 1288 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 H3BQ06 376 aaPredicted RBP3.99□□□□□ -1.77
SPG11-225ENST00000561391 SNAP23O00161 211 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 PRODHO43272 600 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 SMARCA5O60264 1052 aaPredicted RBP3.99□□□□□ -1.77
SPG11-225ENST00000561391 MSCO60682 206 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 CA3P07451 260 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 SNRPB2P08579 225 aaKnown RBP3.99□□□□□ -1.77
SPG11-225ENST00000561391 L1CAMP32004 1257 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 CYP2C19P33261 490 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 RGS2P41220 211 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 NBL1P41271 181 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 KCNJ4P48050 445 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 GCLCP48506 637 aaPredicted RBP3.99□□□□□ -1.77
SPG11-225ENST00000561391 SEPHS1P49903 392 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 SCRN1Q12765 414 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 LURAP1LQ8IV03 231 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 TMEM199Q8N511 208 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 OXR1Q8N573 874 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 NAT16Q8N8M0 369 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 TRPV1Q8NER1 839 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 KCNG4Q8TDN1 519 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 SOCS4Q8WXH5 440 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 EDC3Q96F86 508 aaKnown RBP3.99□□□□□ -1.77
SPG11-225ENST00000561391 SGSM3Q96HU1 749 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 MRGPRX3Q96LB0 322 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 MCMBPQ9BTE3 642 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 IER2Q9BTL4 223 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 SLC12A9Q9BXP2 914 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 KANSL2Q9H9L4 492 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 CHD7Q9P2D1 2997 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 ZNF112Q9UJU3 913 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 AFG3L2Q9Y4W6 797 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 SLC4A7Q9Y6M7 1214 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 ECM29Q5VYK3 1845 aa3.99□□□□□ -1.77
SPG11-225ENST00000561391 GBF1Q92538 1859 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms