RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 BAIAP3O94812 1187 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 HOXD13P35453 343 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 ALCAMQ13740 583 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 L1TD1Q5T7N2 865 aaKnown RBP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 SLC24A5Q71RS6 500 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 SYCP3Q8IZU3 236 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 LINC01599Q8WXQ3 324 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 BICD1Q96G01 975 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 ACCSQ96QU6 501 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 TCHPQ9BT92 498 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-221ENST00000561276 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 CNTNAP2Q9UHC6 1331 aa11.28□□□□□ -0.6
LRRC28-221ENST00000561276 A0A0U1RQF3 1178 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 C9IYK1 514 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 BIN1O00499 593 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 N4BP3O15049 544 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
LRRC28-221ENST00000561276 EFCAB14O75071 495 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 LIG4P49917 911 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 WDR5P61964 334 aaKnown RBP11.27□□□□□ -0.61
LRRC28-221ENST00000561276 FAM189BP81408 668 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 KLHL40Q2TBA0 621 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
LRRC28-221ENST00000561276 UBXN11Q5T124 520 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 ZNF658Q5TYW1 1059 aaPredicted RBP11.27□□□□□ -0.61
LRRC28-221ENST00000561276 ZPBP2Q6X784 338 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 MAP4K3Q8IVH8 894 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 KIAA0895Q8NCT3 520 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 SCFD1Q8WVM8 642 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 PDZD7Q9H5P4 517 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 FAM105AQ9NUU6 356 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 TMEM63CQ9P1W3 806 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 MAN1B1Q9UKM7 699 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 EXOC7Q9UPT5 735 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 TNFSF13BQ9Y275 285 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 GDAQ9Y2T3 454 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 SLC4A7Q9Y6M7 1214 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 GBF1Q92538 1859 aa11.27□□□□□ -0.61
LRRC28-221ENST00000561276 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 CLDN3O15551 220 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 ZNF623O75123 536 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 TOM1L1O75674 476 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 UPP2O95045 317 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 NPTXRO95502 500 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 PIGRP01833 764 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 AMHP03971 560 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 IBSPP21815 317 aaPredicted RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 BMP6P22004 513 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 PRCPP42785 496 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 MATR3P43243 847 aaKnown RBP eCLIP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 KCNJ6P48051 423 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 DEFB103AP81534 67 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 MORC3Q14149 939 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 RASIP1Q5U651 963 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 EEF1DP3Q658K8 133 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 CAVIN1Q6NZI2 390 aaKnown RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 SLC39A4Q6P5W5 647 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 ECHDC2Q86YB7 292 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 NELFCDQ8IXH7 590 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 SMYD4Q8IYR2 804 aaPredicted RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 MYOCDQ8IZQ8 938 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 TOP1MTQ969P6 601 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 ADPGKQ9BRR6 497 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 MTIF3Q9H2K0 278 aaKnown RBP11.26□□□□□ -0.61
LRRC28-221ENST00000561276 PCDHB7Q9Y5E2 793 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 PCDHB2Q9Y5E7 798 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 TTC3P53804 2025 aa11.26□□□□□ -0.61
LRRC28-221ENST00000561276 FNDC1Q4ZHG4 1894 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TISP43B9A030 160 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 ABLIM1O14639 778 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 KIF20AO95235 890 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 EOMESO95936 686 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 SKIP12755 728 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 PROZP22891 400 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 BMT2Q1RMZ1 405 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms