RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NUDT17P0C025 328 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 RARAP10276 462 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 GAP43P17677 238 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 CNGA1P29973 690 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 CTCFP49711 727 aaPredicted RBP15.03■□□□□ -0
RABGGTA-220ENST00000560998 GFPT1Q06210 699 aaPredicted RBP15.03■□□□□ -0
RABGGTA-220ENST00000560998 THEMIS2Q5TEJ8 643 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 HGSNATQ68CP4 663 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 MTHFD1LQ6UB35 978 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 FRMD5Q7Z6J6 570 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 DEFB132Q7Z7B7 95 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 GPIHBP1Q8IV16 184 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 TPH2Q8IWU9 490 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 LMNTD2Q8IXW0 634 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 PIGOQ8TEQ8 1089 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 NAF1Q96HR8 494 aaKnown RBP15.03■□□□□ -0
RABGGTA-220ENST00000560998 NLRC4Q9NPP4 1024 aa15.03■□□□□ -0
RABGGTA-220ENST00000560998 GOLGB1Q14789 3259 aaKnown RBP15.02■□□□□ -0
RABGGTA-220ENST00000560998 O00370 1275 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 PPFIA2O75334 1257 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 SERPING1P05155 500 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 ARP10275 920 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 CHN1P15882 459 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 BAG6P46379 1132 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 PDE6CP51160 858 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 KCNH2Q12809 1159 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 RPS6KA1Q15418 735 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 TAF11Q15544 211 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 SFMBT2Q5VUG0 894 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 CIAPIN1Q6FI81 312 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 C1orf186Q6ZWK4 172 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 ANKRD13CQ8N6S4 541 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 ZNF341Q9BYN7 854 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 WDR11Q9BZH6 1224 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 BCAS3Q9H6U6 928 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 ECT2Q9H8V3 914 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 ARHGEF3Q9NR81 526 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 OLFML3Q9NRN5 406 aa15.02■□□□□ -0
RABGGTA-220ENST00000560998 TYW1Q9NV66 732 aaKnown RBP15.02■□□□□ -0
RABGGTA-220ENST00000560998 TTC36A6NLP5 189 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 PGRMC1O00264 195 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 TLR2O60603 784 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 GCNT3O95395 438 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 FTCDO95954 541 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 OAS1P00973 400 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 ICAM1P05362 532 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 MUTP22033 750 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 SKIV2L2P42285 1042 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 ABL2P42684 1182 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 HSD17B4P51659 736 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 COPS2P61201 443 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 POLR2FP61218 127 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 FAM133BQ5BKY9 247 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 ZC3H12AQ5D1E8 599 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 AGBL1Q96MI9 1066 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 ZNF577Q9BSK1 485 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 STMN4Q9H169 189 aaPredicted RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 GANQ9H2C0 597 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 UNC45AQ9H3U1 944 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 PIM2Q9P1W9 311 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 ARMCX3Q9UH62 379 aaPredicted RBP15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 CCPG1Q9ULG6 757 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 AGAP1Q9UPQ3 857 aa15.02□□□□□ -0.01
RABGGTA-220ENST00000560998 ASTN1O14525 1302 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 ZNF536O15090 1300 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 ATP8B3O60423 1300 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 FER1L6Q2WGJ9 1857 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 CCDC169A6NNP5 214 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 DCDC2CA8MYV0 355 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 NR3C1P04150 777 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 POLD1P28340 1107 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 GBP1P32455 592 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 EPS15P42566 896 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 KCNJ2P63252 427 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 BNIP1Q12981 228 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 RASA3Q14644 834 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 C10orf76Q5T2E6 689 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 B3GNT9Q6UX72 402 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 APBB1IPQ7Z5R6 666 aaPredicted RBP15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 LRRC34Q8IZ02 419 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 RPUSD2Q8IZ73 545 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 DTNBP1Q96EV8 351 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 PAIP2Q9BPZ3 127 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 NEUROG2Q9H2A3 272 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 IRAK4Q9NWZ3 460 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 SCAF8Q9UPN6 1271 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 LRRC42Q9Y546 428 aa15.01□□□□□ -0.01
RABGGTA-220ENST00000560998 IGF2BP3O00425 579 aaKnown RBP eCLIP15□□□□□ -0.01
RABGGTA-220ENST00000560998 ZBTB39O15060 712 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 EIF3DO15371 548 aaKnown RBP eCLIP15□□□□□ -0.01
RABGGTA-220ENST00000560998 SMIM24O75264 130 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 UBOX5O94941 541 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 FAM13AO94988 1023 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 MSH2P43246 934 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 EPHA7Q15375 998 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 TDRD12Q587J7 1177 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 SDCCAG8Q86SQ7 713 aaPredicted RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 ERICH1Q86X53 443 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 KLHL29Q96CT2 875 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms