RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SPPL3Q8TCT6 385 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 KCNG4Q8TDN1 519 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 MRPL38Q96DV4 380 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 FIZ1Q96SL8 496 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 C11orf84Q9BUA3 381 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 NXF3Q9H4D5 531 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 CFAP45Q9UL16 551 aa16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-213ENST00000560856 BRWD1Q9NSI6 2320 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 MYMKA6NI61 221 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 K7ERI5 159 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 B4GALT3O60512 393 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 NPTXRO95502 500 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 DNAJB1P25685 340 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 TXLNAP40222 546 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 CCDC85BQ15834 202 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 NOMO2Q5JPE7 1267 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 GLB1LQ6UWU2 654 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 CCDC73Q6ZRK6 1079 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 DNAJC19Q96DA6 116 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 RSAD1Q9HA92 442 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 PTPRHQ9HD43 1115 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 ALG13Q9NP73 1137 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 TBC1D13Q9NVG8 400 aa16.82■□□□□ 0.28
SNRPA1-213ENST00000560856 PHLPP2Q6ZVD8 1323 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 MYH11P35749 1972 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 ABLIM1O14639 778 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 N4BP3O15049 544 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 ITGA4P13612 1032 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 LAG3P18627 525 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 LIG1P18858 919 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 NCKAP1LP55160 1127 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 KCNT2Q6UVM3 1135 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 PDILTQ8N807 584 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 GSTCDQ8NEC7 633 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 LEO1Q8WVC0 666 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 ACO2Q99798 780 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 LMAN2LQ9H0V9 348 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 NRDE2Q9H7Z3 1164 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 MIOSQ9NXC5 875 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 LARSQ9P2J5 1176 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 KCNG1Q9UIX4 513 aa16.81■□□□□ 0.28
SNRPA1-213ENST00000560856 PBX3P40426 434 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 ATF7IP2Q5U623 682 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 RESP18Q5W5W9 173 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 SV2BQ7L1I2 683 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 PPM1EQ8WY54 764 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 DDX12PQ92771 950 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 GAD1Q99259 594 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 TARS2Q9BW92 718 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 PARVGQ9HBI0 331 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 UBN1Q9NPG3 1134 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 PRDM6Q9NQX0 595 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 AAASQ9NRG9 546 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 INPP5FQ9Y2H2 1132 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 GIT1Q9Y2X7 761 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 PCDHB12Q9Y5F1 795 aa16.8■□□□□ 0.28
SNRPA1-213ENST00000560856 ARL5CA6NH57 179 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 FGF18O76093 207 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 DDHD2O94830 711 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 FAM13AO94988 1023 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 PROZP22891 400 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 AKAP5P24588 427 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 STAT6P42226 847 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 ME1P48163 572 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 SMTNP53814 917 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 PLCB3Q01970 1234 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 PTPROQ16827 1216 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 SPOUT1Q5T280 376 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 DYMQ7RTS9 669 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 HAUS6Q7Z4H7 955 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 SLC39A11Q8N1S5 342 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 ZFP42Q96MM3 310 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 ZNF558Q96NG5 402 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 APOL6Q9BWW8 343 aa16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-213ENST00000560856 TCHHQ07283 1943 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 ATG2AQ2TAZ0 1938 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 ZMYM2Q9UBW7 1377 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 GALTP07902 379 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 MLH1P40692 756 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 BCAR1P56945 870 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 KRT85P78386 507 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 CSPP1Q1MSJ5 1256 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 POF1BQ8WVV4 589 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 ZBTB45Q96K62 511 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 CDT1Q9H211 546 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 KBTBD4Q9NVX7 518 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 SNTG2Q9NY99 539 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms