RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SLC16A4O15374 487 aa13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 DAB2P98082 770 aa13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 CIAPIN1Q6FI81 312 aa13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 RTKN2Q8IZC4 609 aa13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 OTUB1Q96FW1 271 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 FOXP3Q9BZS1 431 aa13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 PGM1P36871 562 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP11P51784 963 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 TBC1D10CQ8IV04 446 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 EML4Q9HC35 981 aaKnown RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 ZHX2Q9Y6X8 837 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 CDH16O75309 829 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 MARK3P27448 753 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 LBRQ14739 615 aaKnown RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 KYAT1Q16773 422 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 ZCCHC17Q9NP64 241 aaKnown RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 BARHL2Q9NY43 387 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 SNX12Q9UMY4 172 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 SUGT1Q9Y2Z0 365 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 ERBB3P21860 1342 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 M0QYV0 167 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 TEX33O43247 280 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 NCK2O43639 380 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 NNMTP40261 264 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 HADHAP40939 763 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 DNAL1Q4LDG9 190 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 RRM2BQ7LG56 351 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 RNPC3Q96LT9 517 aaKnown RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 FAM167BQ9BTA0 163 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 GJB4Q9NTQ9 266 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 CDV3Q9UKY7 258 aaKnown RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 POTECB2RU33 542 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 RAD17O75943 681 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 CASP1P29466 404 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 PSMC5P62195 406 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 NCAPHQ15003 741 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 HIF1AQ16665 826 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 LRIG3Q6UXM1 1119 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 SGMS1Q86VZ5 419 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 GLYCTKQ8IVS8 523 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 AGGF1Q8N302 714 aaeCLIP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 STX19Q8N4C7 294 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 DTNBP1Q96EV8 351 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 NR1H4Q96RI1 486 aaPredicted RBP13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 SLC13A1Q9BZW2 595 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 RUBCNLQ9H714 662 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 CYP4F11Q9HBI6 524 aa13.98□□□□□ -0.17
CSPG4P11-201ENST00000560634 PDXKO00764 312 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 MED21Q13503 144 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 MXD4Q14582 209 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 INPP5AQ14642 412 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 C1orf228Q6PIY5 440 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 PBXIP1Q96AQ6 731 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 EGFL8Q99944 293 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 MRPL4Q9BYD3 311 aaKnown RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 PRKAG2Q9UGJ0 569 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 UTYO14607 1347 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 MYO3BQ8WXR4 1341 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 SSU72P8A0A1W2PR75 194 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 CDC27P30260 824 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 MDH1P40925 334 aaKnown RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 RAD51Q06609 339 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 SZRD1Q7Z422 152 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 OR6P1Q8NGX9 317 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 SGSM3Q96HU1 749 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 SH3GL3Q99963 347 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 PKD2L2Q9NZM6 624 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 ZFATQ9P243 1243 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 C16orf96A6NNT2 1141 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 DEAF1O75398 565 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 CDH2P19022 906 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 KCNA1Q09470 495 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 NBPF20Q3BBV1 942 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 FASTKD1Q53R41 847 aaKnown RBP13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 MIGA2Q7L4E1 593 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 RASSF3Q86WH2 238 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 GANCQ8TET4 914 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 KDM4CQ9H3R0 1056 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
CSPG4P11-201ENST00000560634 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms