RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 RPAP3Q9H6T3 665 aaPredicted RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 MLXIPQ9HAP2 919 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 ROPN1Q9HAT0 212 aaPredicted RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 VAT1LQ9HCJ6 419 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PPANQ9NQ55 473 aaKnown RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SPATS2LQ9NUQ6 558 aaKnown RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 HOXC10Q9NYD6 342 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 RBPJLQ9UBG7 517 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 CTNNAL1Q9UBT7 734 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 MORF4L1Q9UBU8 362 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SYNGAP1Q96PV0 1343 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 MIF4GDA9UHW6 222 aaKnown RBP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 ANKRD65E5RJM6 399 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 KRIT1O00522 736 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 NDC80O14777 642 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 RAD21O60216 631 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 WFS1O76024 890 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 FOSP01100 380 aaPredicted RBP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 GRK4P32298 578 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 HPDP32754 393 aaPredicted RBP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 FLT3LGP49771 235 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 ERVK-9P63128 1117 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 ATP11AP98196 1134 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 IKQ13123 557 aaPredicted RBP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 AP3B2Q13367 1082 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 COG2Q14746 738 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 FAM83BQ5T0W9 1011 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 DENND2CQ68D51 928 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 RASGEF1CQ8N431 466 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 NEK9Q8TD19 979 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 SH3TC2Q8TF17 1288 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 HDAC7Q8WUI4 952 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 ZNF333Q96JL9 665 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 SCLT1Q96NL6 688 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 SPAG5Q96R06 1193 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 FMO2Q99518 471 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 TXNRD2Q9NNW7 524 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 BIN2Q9UBW5 565 aaPredicted RBP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 PCDHA6Q9UN73 950 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 GABRQQ9UN88 632 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 RPL26L1Q9UNX3 145 aaKnown RBP9.23□□□□□ -0.93
CCDC33-209ENST00000560565 RABGAP1Q9Y3P9 1069 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 PCDHA8Q9Y5H6 950 aa9.23□□□□□ -0.93
CCDC33-209ENST00000560565 GTPBP10A4D1E9 387 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 FAM205CA6NFA0 338 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 KCNK3O14649 394 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 ZNF263O14978 683 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 SLC16A3O15427 465 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 RAD51CO43502 376 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CALUO43852 315 aaPredicted RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 ADCY3O60266 1144 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CCNT1O60563 726 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PEX10O60683 326 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 HNRNPCL1O60812 293 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PPFIA2O75334 1257 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 SUN1O94901 812 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 FERP16591 822 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 MAPK4P31152 587 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 MAN1A1P33908 653 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 SLC16A2P36021 539 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PRKCIP41743 596 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CLK2P49760 499 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 GUCY2FP51841 1108 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PMS1P54277 932 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CCNA1P78396 465 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 EHHADHQ08426 723 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 ZNF844Q08AG5 666 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 STK4Q13043 487 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 IL17AQ16552 155 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CALCRLQ16602 461 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 Q3C1V9 767 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 EARS2Q5JPH6 523 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 KIAA1755Q5JYT7 1200 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 ERMARDQ5T6L9 678 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 LBX2Q6XYB7 198 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PEX26Q7Z412 305 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 FRMD5Q7Z6J6 570 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 SLAIN1Q8ND83 568 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 ARMC2Q8NEN0 867 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CCT6BQ92526 530 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 XPO6Q96QU8 1125 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CARD9Q9H257 536 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 CPVLQ9H3G5 476 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PSTPIP2Q9H939 334 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 EBF2Q9HAK2 575 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 MAP3K20Q9NYL2 800 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 AMFRQ9UKV5 643 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 NOC2LQ9Y3T9 749 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PCDHA1Q9Y5I3 950 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 DUSP10Q9Y6W6 482 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 MYH9P35579 1960 aaKnown RBP9.22□□□□□ -0.93
CCDC33-209ENST00000560565 PFASO15067 1338 aa9.22□□□□□ -0.93
CCDC33-209ENST00000560565 MYH11P35749 1972 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms