RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 CCDC39Q9UFE4 941 aa8.86□□□□□ -0.99
LRRC28-219ENST00000560483 DBR1Q9UK59 544 aaKnown RBP8.86□□□□□ -0.99
LRRC28-219ENST00000560483 TMEM265A0A087WTH1 108 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 IGKV6-21A0A0C4DH24 114 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 LCHNA4D1U4 455 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 TBKBP1A7MCY6 615 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 F13A1P00488 732 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 MUTP22033 750 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 LONP1P36776 959 aaKnown RBP8.85□□□□□ -0.99
LRRC28-219ENST00000560483 SARSP49591 514 aaKnown RBP8.85□□□□□ -0.99
LRRC28-219ENST00000560483 GRIN2CQ14957 1233 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
LRRC28-219ENST00000560483 IL17AQ16552 155 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 ECM1Q16610 540 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 SLC24A5Q71RS6 500 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 SRGAP1Q7Z6B7 1085 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 NPAS4Q8IUM7 802 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 EHBP1Q8NDI1 1231 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 TOP1MTQ969P6 601 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 AK8Q96MA6 479 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 ZFP42Q96MM3 310 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 USP28Q96RU2 1077 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 CDX2Q99626 313 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-219ENST00000560483 APOL6Q9BWW8 343 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 TTYH1Q9H313 450 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-219ENST00000560483 TMX1Q9H3N1 280 aa8.85□□□□□ -0.99
LRRC28-219ENST00000560483 MYH11P35749 1972 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 PTPRSQ13332 1948 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 MYH15Q9Y2K3 1946 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 SPTLC2O15270 562 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 MGEA5O60502 916 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 EYA4O95677 639 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 PLA2G4BP0C869 781 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CA8P35219 290 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CTNNB1P35222 781 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 ANP32AP39687 249 aaKnown RBP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 MATR3P43243 847 aaKnown RBP eCLIP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 ME1P48163 572 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 SH3BP2P78314 561 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 DMP1Q13316 513 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 KARSQ15046 597 aaKnown RBP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 PPP2R5AQ15172 486 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CCDC85BQ15834 202 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 LINC01465Q8N7H1 131 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 KRI1Q8N9T8 703 aaKnown RBP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 ASAP3Q8TDY4 903 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 KIFAP3Q92845 792 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CPB2Q96IY4 423 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CLIC6Q96NY7 704 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 TGS1Q96RS0 853 aaKnown RBP8.84□□□□□ -0.99
LRRC28-219ENST00000560483 PANK2Q9BZ23 570 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CSRNP2Q9H175 543 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 C2orf40Q9H1Z8 148 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 XPNPEP1Q9NQW7 623 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 RGS18Q9NS28 235 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 MTMR10Q9NXD2 777 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 CFAP45Q9UL16 551 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 INPP5FQ9Y2H2 1132 aa8.84□□□□□ -0.99
LRRC28-219ENST00000560483 TTC3P53804 2025 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 ADGRA3Q8IWK6 1321 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 LINC01553A4QN01 128 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 RFXAPO00287 272 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 HIP1RO75146 1068 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 TBCAO75347 108 aaKnown RBP8.83□□□□□ -1
LRRC28-219ENST00000560483 FAM13AO94988 1023 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 FGFR1P11362 822 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 SKIP12755 728 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 CYP11B2P19099 503 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 PLCG1P19174 1290 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 GLRA2P23416 452 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 STAT6P42226 847 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 GATMP50440 423 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 PEX3P56589 373 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 TAP1Q03518 808 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 GRIN1Q05586 938 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 RNASELQ05823 741 aaKnown RBP8.83□□□□□ -1
LRRC28-219ENST00000560483 PKP1Q13835 747 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 CAPSQ13938 189 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 RRAGBQ5VZM2 374 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 NOTUMQ6P988 496 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 RTN4RL1Q86UN2 441 aaPredicted RBP8.83□□□□□ -1
LRRC28-219ENST00000560483 GPBP1Q86WP2 473 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 HACE1Q8IYU2 909 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 PDILTQ8N807 584 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 GDPD5Q8WTR4 605 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 LINC01599Q8WXQ3 324 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 IRF7Q92985 503 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 EPSTI1Q96J88 318 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 DRC1Q96MC2 740 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 GUCD1Q96NT3 240 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 CEP89Q96ST8 783 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 C17orf80Q9BSJ5 609 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 KIFC3Q9BVG8 833 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 KMT5AQ9NQR1 393 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 CHST12Q9NRB3 414 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 ATP6V1DQ9Y5K8 247 aa8.83□□□□□ -1
LRRC28-219ENST00000560483 SFI1A8K8P3 1242 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms