RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 PCDHB1Q9Y5F3 818 aa7.17□□□□□ -1.26
MARK3-220ENST00000560417 CFAP20Q9Y6A4 193 aaKnown RBP7.17□□□□□ -1.26
MARK3-220ENST00000560417 MTSS1O43312 755 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 SGTAO43765 313 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 TUSC2O75896 110 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 CYP1A1P04798 512 aaPredicted RBP7.16□□□□□ -1.26
MARK3-220ENST00000560417 KIR2DL3P43628 341 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 ADAM8P78325 824 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 PURAQ00577 322 aaKnown RBP7.16□□□□□ -1.26
MARK3-220ENST00000560417 TBR1Q16650 682 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 SLC4A10Q6U841 1118 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 C7orf25Q9BPX7 421 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 SARGQ9BW04 601 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 C14orf93Q9H972 538 aaKnown RBP7.16□□□□□ -1.26
MARK3-220ENST00000560417 DDX21Q9NR30 783 aaKnown RBP eCLIP7.16□□□□□ -1.26
MARK3-220ENST00000560417 TRPS1Q9UHF7 1281 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 RNF114Q9Y508 228 aa7.16□□□□□ -1.26
MARK3-220ENST00000560417 FRMPD2Q68DX3 1309 aaPredicted RBP7.16□□□□□ -1.26
MARK3-220ENST00000560417 PRAMEF4O60810 478 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ALDH1A2O94788 518 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ENDOD1O94919 500 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ALDH2P05091 517 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ADSLP30566 484 aaPredicted RBP7.15□□□□□ -1.26
MARK3-220ENST00000560417 RRADP55042 308 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 HGFACQ04756 655 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ZMAT1Q5H9K5 638 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
MARK3-220ENST00000560417 USP30Q70CQ3 517 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 GPR155Q7Z3F1 870 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 PPP1R35Q8TAP8 253 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 NSUN6Q8TEA1 469 aaKnown RBP7.15□□□□□ -1.26
MARK3-220ENST00000560417 KAT5Q92993 513 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 SLC7A6OSQ96CW6 309 aaPredicted RBP7.15□□□□□ -1.26
MARK3-220ENST00000560417 SLC39A13Q96H72 371 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 DMRTA2Q96SC8 542 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 SLC38A3Q99624 504 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 LRFN3Q9BTN0 628 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 BCO1Q9HAY6 547 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 TLR9Q9NR96 1032 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 ING3Q9NXR8 418 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.15□□□□□ -1.26
MARK3-220ENST00000560417 PCDHA13Q9Y5I0 950 aa7.15□□□□□ -1.26
MARK3-220ENST00000560417 UBXN7O94888 489 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 HRGP04196 525 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 ECHS1P30084 290 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 SREBF1P36956 1147 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 ADCY7P51828 1080 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 CDC42EP1Q00587 391 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 NFYCQ13952 458 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 PPP4R3AQ6IN85 833 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 OR7D4Q8NG98 312 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 FBXO41Q8TF61 875 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 ZNF480Q8WV37 535 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 LCORQ96JN0 433 aaPredicted RBP7.14□□□□□ -1.27
MARK3-220ENST00000560417 SLC6A15Q9H2J7 730 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 TMEM60Q9H2L4 133 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 MAN1C1Q9NR34 630 aa7.14□□□□□ -1.27
MARK3-220ENST00000560417 RBM8AQ9Y5S9 174 aaKnown RBP7.14□□□□□ -1.27
MARK3-220ENST00000560417 NPIPB6E9PJ23 425 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 B3GALT2O43825 422 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 TOX4O94842 621 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 ZBED1O96006 694 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 VSIG10L2P0DP72 767 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 MYBP10242 640 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 CRHR1P34998 444 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 TARDBPQ13148 414 aaKnown RBP eCLIP7.13□□□□□ -1.273e-6■■■■□ 21.4
MARK3-220ENST00000560417 UBE4AQ14139 1066 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 XP32Q5T750 250 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 SRGAP1Q7Z6B7 1085 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 TTC7BQ86TV6 843 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 TMEM151BQ8IW70 566 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 KIAA0319LQ8IZA0 1049 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 GCDHQ92947 438 aaPredicted RBP7.13□□□□□ -1.27
MARK3-220ENST00000560417 TTC17Q96AE7 1141 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 MRGPRX4Q96LA9 322 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 FMNL2Q96PY5 1086 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 CGRRF1Q99675 332 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 JADE2Q9NQC1 790 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 CHST12Q9NRB3 414 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 GPRC5DQ9NZD1 345 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 FAM184BQ9ULE4 1060 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 ZDHHC9Q9Y397 364 aa7.13□□□□□ -1.27
MARK3-220ENST00000560417 MROH6A6NGR9 719 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 FAM227AF5H4B4 570 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 TPP1O14773 563 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 SLC16A6O15403 523 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 GASTP01350 101 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 RHCEP18577 417 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 IL12RB1P42701 662 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 RAP1GAPP47736 663 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 MAP2K6P52564 334 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 AGFG1P52594 562 aaKnown RBP7.12□□□□□ -1.27
MARK3-220ENST00000560417 SLURP1P55000 103 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 RHDQ02161 417 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 KSR2Q6VAB6 950 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 RALYLQ86SE5 291 aaKnown RBP7.12□□□□□ -1.27
MARK3-220ENST00000560417 RHOT1Q8IXI2 618 aa7.12□□□□□ -1.27
MARK3-220ENST00000560417 CAMKK1Q8N5S9 505 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms