RNA–Protein interactions for RNA: ENST00000559978.1

CD276-208, Transcript of CD276 molecule, human

TSL 2

Gene CD276, Length 503 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD276-208	ENST00000559978	GPC3	P51654	580 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	DSG1	Q02413	1049 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	LRRC32	Q14392	662 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	LONRF3	Q496Y0	759 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	HEATR6	Q6AI08	1181 aa	Known RBP	11.63	□□□□□ -0.55
CD276-208	ENST00000559978	EFCAB12	Q6NXP0	572 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	MIS18BP1	Q6P0N0	1132 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	CACNA2D4	Q7Z3S7	1137 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.63	□□□□□ -0.55
CD276-208	ENST00000559978	TICAM2	Q86XR7	235 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.63	□□□□□ -0.55
CD276-208	ENST00000559978	PIBF1	Q8WXW3	757 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	FAM3C	Q92520	227 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	FAM227B	Q96M60	508 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	BRD9	Q9H8M2	597 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	FAM105A	Q9NUU6	356 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	KCNH3	Q9ULD8	1083 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	PIN4	Q9Y237	131 aa	Known RBP	11.63	□□□□□ -0.55
CD276-208	ENST00000559978	GPSM3	Q9Y4H4	160 aa		11.63	□□□□□ -0.55
CD276-208	ENST00000559978	CNTNAP2	Q9UHC6	1331 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	NR1I2	O75469	434 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	FGFR4	P22455	802 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	HOXA9	P31269	272 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	MPL	P40238	635 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	SLC35G1	Q2M3R5	365 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	PLA2G2C	Q5R387	149 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	PPM1L	Q5SGD2	360 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	C1orf228	Q6PIY5	440 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	ABHD15	Q6UXT9	468 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	WDR5B	Q86VZ2	330 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	PROSER1	Q86XN7	944 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	GPR65	Q8IYL9	337 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	ZNF687	Q8N1G0	1237 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	RRP36	Q96EU6	259 aa	Known RBP	11.62	□□□□□ -0.55
CD276-208	ENST00000559978	FAM167A	Q96KS9	214 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	MXRA8	Q9BRK3	442 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.62	□□□□□ -0.55
CD276-208	ENST00000559978	PSTPIP2	Q9H939	334 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	IGSF5	Q9NSI5	407 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	FNIP2	Q9P278	1114 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	TCEAL9	Q9UHQ7	104 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	POLI	Q9UNA4	740 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.62	□□□□□ -0.55
CD276-208	ENST00000559978	MSRB2	Q9Y3D2	182 aa		11.62	□□□□□ -0.55
CD276-208	ENST00000559978	B4GALT3	O60512	393 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	ZNF623	O75123	536 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	DDHD2	O94830	711 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	SEC24B	O95487	1268 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	CSRP1	P21291	193 aa	Known RBP	11.61	□□□□□ -0.55
CD276-208	ENST00000559978	OR1G1	P47890	313 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	NTHL1	P78549	312 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	CDC42EP1	Q00587	391 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	IMMT	Q16891	758 aa	Known RBP	11.61	□□□□□ -0.55
CD276-208	ENST00000559978	GLYCTK	Q8IVS8	523 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	NPAS3	Q8IXF0	933 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	RNF168	Q8IYW5	571 aa	Predicted RBP	11.61	□□□□□ -0.55
CD276-208	ENST00000559978	GLIS3	Q8NEA6	775 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	GAB3	Q8WWW8	586 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	IRF7	Q92985	503 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	INO80B	Q9C086	356 aa	Predicted RBP	11.61	□□□□□ -0.55
CD276-208	ENST00000559978	DCTPP1	Q9H773	170 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	RSAD1	Q9HA92	442 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	MARCH5	Q9NX47	278 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	GDE1	Q9NZC3	331 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	FBXW11	Q9UKB1	542 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	PIAS3	Q9Y6X2	628 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	SPTA1	P02549	2419 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	SHROOM3	Q8TF72	1996 aa		11.61	□□□□□ -0.55
CD276-208	ENST00000559978	APC2	O95996	2303 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	CACNA1E	Q15878	2313 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	ERICH2	A1L162	156 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	C4orf47	A7E2U8	309 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978		K7ESF4	209 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	DDX39A	O00148	427 aa	Known RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	RPP40	O75818	363 aa	Known RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	TOP3B	O95985	862 aa	Known RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	CCDC192	P0DO97	292 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	HOXA6	P31267	233 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	RAP1GAP	P47736	663 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	C19orf57	Q0VDD7	668 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	ITGB3BP	Q13352	177 aa	Predicted RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	SEC23A	Q15436	765 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	USP41	Q3LFD5	358 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	PABPC1L	Q4VXU2	614 aa	Known RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	KIAA1211L	Q6NV74	962 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	SWSAP1	Q6NVH7	229 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	LILRA6	Q6PI73	481 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	C19orf48	Q6RUI8	117 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	LRRC71	Q8N4P6	559 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	LINC01465	Q8N7H1	131 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	ITFG1	Q8TB96	612 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	ADAM32	Q8TC27	787 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	ELSPBP1	Q96BH3	223 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	MSANTD3	Q96H12	275 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	ZNF668	Q96K58	619 aa	Predicted RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	MBOAT7	Q96N66	472 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	LY9	Q9HBG7	655 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	AGO4	Q9HCK5	861 aa	Known RBP	11.6	□□□□□ -0.55
CD276-208	ENST00000559978	PCDHA6	Q9UN73	950 aa		11.6	□□□□□ -0.55
CD276-208	ENST00000559978	PCDHA8	Q9Y5H6	950 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms