RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GPRC5CQ9NQ84 441 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 XPNPEP3Q9NQH7 507 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 ZNF302Q9NR11 478 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 FAM184BQ9ULE4 1060 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 PCDHA10Q9Y5I2 948 aa5.81□□□□□ -1.48
SPG11-220ENST00000559933 DNAH12Q6ZR08 3092 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 KDM3AQ9Y4C1 1321 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 IGKV6D-21A0A0A0MT36 114 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 LOC102724159A0A0B4J2E5 919 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 ZBTB42B2RXF5 422 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 MAFGO15525 162 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 SEPT4O43236 478 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 KLRC4O43908 158 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 ADAMTS4O75173 837 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 ATG7O95352 703 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 P4HBP07237 508 aaKnown RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 SLFN14P0C7P3 912 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 CYP11B2P19099 503 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 HOXD10P28358 340 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 YWHABP31946 246 aaKnown RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 SFNP31947 248 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 QARSP47897 775 aaKnown RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 RARRES1P49788 294 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 PSMC5P62195 406 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 IGBP1P78318 339 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 ASIC1P78348 528 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 ZNF200P98182 395 aaPredicted RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 DRP2Q13474 957 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 CCINQ13939 588 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 POSTNQ15063 836 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 PLCB4Q15147 1175 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 PWP2Q15269 919 aaKnown RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 ARSHQ5FYA8 562 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 IQSEC1Q6DN90 963 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 C11orf57Q6ZUT1 292 aaPredicted RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 CTU1Q7Z7A3 348 aaKnown RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 SMAP1Q8IYB5 467 aaPredicted RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 CEP57L1Q8IYX8 460 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 MSL3Q8N5Y2 521 aaKnown RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 IQUBQ8NA54 791 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 SEPT1Q8WYJ6 367 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 KAT2BQ92831 832 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 GLG1Q92896 1179 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 CCDC97Q96F63 343 aaPredicted RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 REEP2Q9BRK0 252 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 C16orf70Q9BSU1 422 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 KIFC3Q9BVG8 833 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.8□□□□□ -1.48
SPG11-220ENST00000559933 TNMDQ9H2S6 317 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 IKZF4Q9H2S9 585 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 RNPEPQ9H4A4 650 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 TUFT1Q9NNX1 390 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 KLK14Q9P0G3 267 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 TBC1D7Q9P0N9 293 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 CCDC39Q9UFE4 941 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 GDAQ9Y2T3 454 aa5.8□□□□□ -1.48
SPG11-220ENST00000559933 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.8□□□□□ -1.48
SPG11-220ENST00000559933 EMSYQ7Z589 1322 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 MYH9P35579 1960 aaKnown RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 ARHGEF35A5YM69 484 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 C1QTNF9BB2RNN3 333 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 LILRB5O75023 590 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 HIP1RO75146 1068 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 EYA4O95677 639 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 PROCP04070 461 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 GJB1P08034 283 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 TGFB3P10600 412 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 RARBP10826 455 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 CCL5P13501 91 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 IDEP14735 1019 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 BMP6P22004 513 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 WEE1P30291 646 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 CTCFP49711 727 aaPredicted RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 IDH3AP50213 366 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 ARSDP51689 593 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 STAT5BP51692 787 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 CASP5P51878 434 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 PCSK7Q16549 785 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 FSCN1Q16658 493 aaKnown RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 C11orf91Q3C1V1 193 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 SLC9C1Q4G0N8 1177 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 XKR9Q5GH70 373 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 RINT1Q6NUQ1 792 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 KCNV1Q6PIU1 500 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 RUFY4Q6ZNE9 571 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 GAS2L3Q86XJ1 694 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 KSR1Q8IVT5 923 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 DAW1Q8N136 415 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 LRRC71Q8N4P6 559 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 ASAP3Q8TDY4 903 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 AFAP1L1Q8TED9 768 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 DIS3LQ8TF46 1054 aaKnown RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 BSNDQ8WZ55 320 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 ATP6V0A1Q93050 837 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 DNAJC19Q96DA6 116 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 TRIM11Q96F44 468 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 CEP170P1Q96L14 293 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 CEP89Q96ST8 783 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 TRIM9Q9C026 710 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms