RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 STARD7Q9NQZ5 370 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
HERC1-205ENST00000559886 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
HERC1-205ENST00000559886 PTGISQ16647 500 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 AMHR2Q16671 573 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 FAM186BQ8IYM0 893 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 FBXL18Q96ME1 805 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
HERC1-205ENST00000559886 GCOM2Q9BZD3 368 aaPredicted RBP13.32□□□□□ -0.28
HERC1-205ENST00000559886 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
HERC1-205ENST00000559886 ARMCX3Q9UH62 379 aaPredicted RBP13.32□□□□□ -0.28
HERC1-205ENST00000559886 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
HERC1-205ENST00000559886 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
HERC1-205ENST00000559886 MAPK13O15264 365 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
HERC1-205ENST00000559886 TOM1L1O75674 476 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 TPM2P07951 284 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
HERC1-205ENST00000559886 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 HAPLN2Q9GZV7 340 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 A0A0B4J269 797 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 TEX33O43247 280 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 DARSP14868 501 aaKnown RBP13.31□□□□□ -0.28
HERC1-205ENST00000559886 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 ZSWIM2Q8NEG5 633 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 WNT8BQ93098 351 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 ZBTB45Q96K62 511 aaPredicted RBP13.31□□□□□ -0.28
HERC1-205ENST00000559886 OSMRQ99650 979 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 SEZ6LQ9BYH1 1024 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 GINS2Q9Y248 185 aa13.31□□□□□ -0.28
HERC1-205ENST00000559886 CNTNAP2Q9UHC6 1331 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 ARVCFO00192 962 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 B4GALT5O43286 388 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 SGPL1O95470 568 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 PROZP22891 400 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.28
HERC1-205ENST00000559886 ATF7IP2Q5U623 682 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 TRMT13Q9NUP7 481 aaKnown RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 AGO2Q9UKV8 859 aaKnown RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 ABLIM1O14639 778 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 CLDN3O15551 220 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 MCCD1P59942 119 aaPredicted RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 MRPS6P82932 125 aaKnown RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 PPP2R3AQ06190 1150 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 PTK7Q13308 1070 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 GPD1LQ8N335 351 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 U2AF1L4Q8WU68 220 aaKnown RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 SAAL1Q96ER3 474 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 CELF4Q9BZC1 486 aaKnown RBP13.3□□□□□ -0.28
HERC1-205ENST00000559886 KIAA1586Q9HCI6 787 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 ANKFY1Q9P2R3 1169 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 TNFSF13BQ9Y275 285 aa13.3□□□□□ -0.28
HERC1-205ENST00000559886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.28
HERC1-205ENST00000559886 GOLGA8IPA6NC78 632 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 GOLGA8JA6NMD2 632 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 EXTL3O43909 919 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 TSPAN1O60635 241 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 PBX1P40424 430 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 CDK7P50613 346 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 UBXN1Q04323 297 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 MCL1Q07820 350 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 SNX17Q15036 470 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 SNRNP35Q16560 246 aaKnown RBP13.29□□□□□ -0.28
HERC1-205ENST00000559886 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 M0QZ92 97 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 PES1O00541 588 aaKnown RBP13.29□□□□□ -0.28
HERC1-205ENST00000559886 ERLIN2O94905 339 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
HERC1-205ENST00000559886 ARF4P18085 180 aaPredicted RBP13.29□□□□□ -0.28
HERC1-205ENST00000559886 HSP90AA2PQ14568 343 aaPredicted RBP13.29□□□□□ -0.28
HERC1-205ENST00000559886 MPZL3Q6UWV2 235 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 INTS8Q75QN2 995 aaKnown RBP13.29□□□□□ -0.28
HERC1-205ENST00000559886 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 TMEM40Q8WWA1 233 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 SLC35C1Q96A29 364 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 MSTO1Q9BUK6 570 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 TRPV2Q9Y5S1 764 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 CDY2AQ9Y6F7 541 aa13.29□□□□□ -0.28
HERC1-205ENST00000559886 B4GALT4O60513 344 aa13.28□□□□□ -0.28
HERC1-205ENST00000559886 TFRCP02786 760 aaKnown RBP13.28□□□□□ -0.28
HERC1-205ENST00000559886 ADRB2P07550 413 aa13.28□□□□□ -0.28
HERC1-205ENST00000559886 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.284e-6■■□□□ 11.8
HERC1-205ENST00000559886 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
HERC1-205ENST00000559886 BFSP1Q12934 665 aa13.28□□□□□ -0.28
HERC1-205ENST00000559886 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
HERC1-205ENST00000559886 EEF1DP3Q658K8 133 aa13.28□□□□□ -0.28
HERC1-205ENST00000559886 DHX38Q92620 1227 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms