RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SWSAP1Q6NVH7 229 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 CCDC60Q8IWA6 550 aaPredicted RBP19.37■□□□□ 0.69
SNX1-208ENST00000559844 DAAM1Q9Y4D1 1078 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 EXOC3O60645 756 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 ZNF286BP0CG31 522 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 CYP2J2P51589 502 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 NKX3-2P78367 333 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 HAUS6Q7Z4H7 955 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 SRGAP1Q7Z6B7 1085 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 RNF180Q86T96 592 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 TRIM50Q86XT4 487 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 SECISBP2LQ93073 1101 aaKnown RBP19.36■□□□□ 0.69
SNX1-208ENST00000559844 C17orf75Q9HAS0 396 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 EXOC7Q9UPT5 735 aa19.36■□□□□ 0.69
SNX1-208ENST00000559844 BZW2Q9Y6E2 419 aaKnown RBP19.36■□□□□ 0.69
SNX1-208ENST00000559844 RCCD1A6NED2 376 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 HOXD8P13378 290 aaPredicted RBP19.35■□□□□ 0.69
SNX1-208ENST00000559844 UCHL3P15374 230 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 SLC9A1P19634 815 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 MAGEA1P43355 309 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 SMTNP53814 917 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 FAM102BQ5T8I3 360 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 DPY19L2P1Q6NXN4 242 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 GOLGA1Q92805 767 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 KIFAP3Q92845 792 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 GLG1Q92896 1179 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 SPAG5Q96R06 1193 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 LACRTQ9GZZ8 138 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 AZI2Q9H6S1 392 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 ZNF302Q9NR11 478 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 ANO9A1A5B4 782 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 PJA2O43164 708 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 LGALS2P05162 132 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 GJB1P08034 283 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 MYL3P08590 195 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 CST5P28325 142 aaPredicted RBP19.35■□□□□ 0.69
SNX1-208ENST00000559844 PLA2G4FQ68DD2 849 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 ANO5Q75V66 913 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 KLHDC9Q8NEP7 349 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 CEP170P1Q96L14 293 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 PCYT2Q99447 389 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 IKZF4Q9H2S9 585 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 GCNT4Q9P109 453 aa19.35■□□□□ 0.69
SNX1-208ENST00000559844 EMSYQ7Z589 1322 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 IGKV6D-21A0A0A0MT36 114 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 ZEB2O60315 1214 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 KRT13P13646 458 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 FMO5P49326 533 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 STAT5BP51692 787 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 NPEPPSP55786 919 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 PEX3P56589 373 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 KLHL30Q0D2K2 578 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
SNX1-208ENST00000559844 FAM160B1Q5W0V3 765 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 ARRDC4Q8NCT1 418 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 U2AF1L4Q8WU68 220 aaKnown RBP19.34■□□□□ 0.69
SNX1-208ENST00000559844 KAT6AQ92794 2004 aa19.34■□□□□ 0.69
SNX1-208ENST00000559844 TMEM150BA6NC51 233 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 MAPK13O15264 365 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 TACC1O75410 805 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 LGR5O75473 907 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 ACTN1P12814 892 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 ANXA13P27216 316 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 AMPD2Q01433 879 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 BFSP1Q12934 665 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 DMP1Q13316 513 aaPredicted RBP19.33■□□□□ 0.69
SNX1-208ENST00000559844 KCNA10Q16322 511 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 INTS8Q75QN2 995 aaKnown RBP19.33■□□□□ 0.69
SNX1-208ENST00000559844 RSRC2Q7L4I2 434 aaKnown RBP19.33■□□□□ 0.69
SNX1-208ENST00000559844 MCPH1Q8NEM0 835 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 TRIM58Q8NG06 486 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 SPIRE2Q8WWL2 714 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 C16orf70Q9BSU1 422 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 TFR2Q9UP52 801 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 IGSF9BQ9UPX0 1349 aa19.33■□□□□ 0.69
SNX1-208ENST00000559844 SLC16A4O15374 487 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 DGAT1O75907 488 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 STBD1O95210 358 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 SGPL1O95470 568 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 CHMP4BP1P59074 171 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 APBA1Q02410 837 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 GFPT1Q06210 699 aaPredicted RBP19.33■□□□□ 0.68
SNX1-208ENST00000559844 PAPD7Q5XG87 772 aaKnown RBP19.33■□□□□ 0.68
SNX1-208ENST00000559844 TRMT1LQ7Z2T5 733 aaKnown RBP19.33■□□□□ 0.68
SNX1-208ENST00000559844 FMNL3Q8IVF7 1028 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 PCSK9Q8NBP7 692 aaKnown RBP19.33■□□□□ 0.68
SNX1-208ENST00000559844 AFAP1L1Q8TED9 768 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 RABGGTAQ92696 567 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 TMEM106CQ9BVX2 250 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 SMARCAD1Q9H4L7 1026 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 SIX2Q9NPC8 291 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 KCNG1Q9UIX4 513 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 OGDHLQ9ULD0 1010 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 MAFBQ9Y5Q3 323 aaPredicted RBP19.33■□□□□ 0.68
SNX1-208ENST00000559844 FHOD1Q9Y613 1164 aa19.33■□□□□ 0.68
SNX1-208ENST00000559844 ZNF862O60290 1169 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 N4BP1O75113 896 aaKnown RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 ASGR1P07306 291 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 MARK3P27448 753 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 ABCD1P33897 745 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms