RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 FYB2Q5VWT5 728 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 OTUD7BQ6GQQ9 843 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 FBXL19Q6PCT2 694 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 RASGRP2Q7LDG7 609 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 FERMT3Q86UX7 667 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 OTUD6BQ8N6M0 293 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 FBXO18Q8NFZ0 1043 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 KIF18AQ8NI77 898 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 RNF141Q8WVD5 230 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 MKL1Q969V6 931 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 ZBTB9Q96C00 473 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 DCPSQ96C86 337 aaKnown RBP7.9□□□□□ -1.14
ZEB1-216ENST00000559496 CCDC74BQ96LY2 380 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 ZNF341Q9BYN7 854 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 GPR62Q9BZJ7 368 aa7.9□□□□□ -1.14
ZEB1-216ENST00000559496 ZSCAN16Q9H4T2 348 aaPredicted RBP7.9□□□□□ -1.14
ZEB1-216ENST00000559496 FRMPD2Q68DX3 1309 aaPredicted RBP7.9□□□□□ -1.15
ZEB1-216ENST00000559496 GOLGB1Q14789 3259 aaKnown RBP7.9□□□□□ -1.15
ZEB1-216ENST00000559496 BAZ2BQ9UIF8 2168 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 hCG_1642624A0A1W2PR95 340 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 IQCA1LA6NCM1 817 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 MAFGO15525 162 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 GREM1O60565 184 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 ASNSP08243 561 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SNHG28P0DPA3 235 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SRFP11831 508 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 XBP1P17861 261 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 TPP2P29144 1249 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 EIF4A3P38919 411 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 ZNF543Q08ER8 600 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 MRPL58Q14197 206 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 PKN1Q16512 942 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 ZSCAN23Q3MJ62 389 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SUPT20HL1Q3ZLR7 823 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 GPATCH4Q5T3I0 446 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 ZNF648Q5T619 568 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 PRAMEF18Q5VWM3 479 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SLFN13Q68D06 897 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 KRT40Q6A162 431 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 LRSAM1Q6UWE0 723 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 USP50Q70EL3 339 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SIAH1Q8IUQ4 282 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SUGP1Q8IWZ8 645 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 GPATCH11Q8N954 259 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 DCAF4Q8WV16 495 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 CHAMP1Q96JM3 812 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 FAM210AQ96ND0 272 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 TACO1Q9BSH4 297 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SPZ1Q9BXG8 430 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 DEF6Q9H4E7 631 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 CXorf56Q9H5V9 222 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 GJB4Q9NTQ9 266 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 GINM1Q9NU53 330 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 GPATCH2Q9NW75 528 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 KLHL3Q9UH77 587 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SYNPO2Q9UMS6 1093 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 JRKLQ9Y4A0 524 aa7.89□□□□□ -1.15
ZEB1-216ENST00000559496 POLR2AP24928 1970 aaKnown RBP7.89□□□□□ -1.15
ZEB1-216ENST00000559496 SCN4AP35499 1836 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 ATAD5Q96QE3 1844 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 LRRC10BA6NIK2 292 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 ADM5C9JUS6 153 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 CYTH3O43739 400 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 CTNND1O60716 968 aaKnown RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 NDUFB10O96000 172 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 GLI1P08151 1106 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SCG2P13521 617 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 ATP2B1P20020 1258 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SMARCA1P28370 1054 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SLC1A4P43007 532 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 NCBP1Q09161 790 aaKnown RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 GNL2Q13823 731 aaKnown RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SAFBQ15424 915 aaKnown RBP eCLIP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 PFKFB3Q16875 520 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SLC35G1Q2M3R5 365 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 KRT26Q7Z3Y9 468 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 USP48Q86UV5 1035 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 CREG2Q8IUH2 290 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 DTWD2Q8NBA8 298 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 GMCL1P1Q8NEA9 526 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 ZNF397Q8NF99 534 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 FBXO27Q8NI29 283 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 BAHD1Q8TBE0 780 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 ACER1Q8TDN7 264 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 RRP36Q96EU6 259 aaKnown RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 CPVLQ9H3G5 476 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 TAF1DQ9H5J8 278 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SH2D4AQ9H788 454 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.88□□□□□ -1.15
ZEB1-216ENST00000559496 SLAMF8Q9P0V8 285 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 VPS54Q9P1Q0 977 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 DOCK1Q14185 1865 aa7.88□□□□□ -1.15
ZEB1-216ENST00000559496 WDR90Q96KV7 1748 aa7.87□□□□□ -1.15
ZEB1-216ENST00000559496 SSC5DA1L4H1 1573 aa7.87□□□□□ -1.15
ZEB1-216ENST00000559496 TCHHQ07283 1943 aa7.87□□□□□ -1.15
ZEB1-216ENST00000559496 A0A1W2PRG0 241 aa7.87□□□□□ -1.15
ZEB1-216ENST00000559496 CCDC189A1A4V9 331 aa7.87□□□□□ -1.15
ZEB1-216ENST00000559496 KLHL33A6NCF5 533 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms