RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 LRRC63Q05C16 580 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 PPFIA1Q13136 1202 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 PSMD2Q13200 908 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 PTK7Q13308 1070 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 ALCAMQ13740 583 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 CTTNQ14247 550 aaKnown RBP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 ECM1Q16610 540 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 PTGISQ16647 500 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 TCTN1Q2MV58 587 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 FOXR2Q6PJQ5 311 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 RUFY4Q6ZNE9 571 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 C1orf186Q6ZWK4 172 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 C7orf31Q8N865 590 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 OR8K1Q8NGG5 319 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 LMBR1Q8WVP7 490 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 ZBTB10Q96DT7 871 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 CEP170P1Q96L14 293 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 NTPCRQ9BSD7 190 aaKnown RBP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 TUBGCP2Q9BSJ2 902 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 BHMT2Q9H2M3 363 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 ST6GALNAC4Q9H4F1 302 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 ATP6V0A4Q9HBG4 840 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 LARSQ9P2J5 1176 aaKnown RBP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 MYO1AQ9UBC5 1043 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 TRPC6Q9Y210 931 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 LUC7L2Q9Y383 392 aaKnown RBP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 SQORQ9Y6N5 450 aa8.4□□□□□ -1.06
LRRC28-211ENST00000558890 V9GYY5 206 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-211ENST00000558890 UBE4BO95155 1302 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CDH23Q9H251 3354 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 TLR3O15455 904 aaKnown RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CXCL10P02778 98 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 IQCF3P0C7M6 154 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 IDEP14735 1019 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 TRIM21P19474 475 aaKnown RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CYLC1P35663 651 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 POLGP54098 1239 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 PMS1P54277 932 aaKnown RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 KRT83P78385 493 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 EHHADHQ08426 723 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 MCM6Q14566 821 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 MTF1Q14872 753 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 GRIK4Q16099 956 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 XKR9Q5GH70 373 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM240Q5SV17 173 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 C9orf50Q5SZB4 431 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 IER5Q5VY09 327 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 KCNK18Q7Z418 384 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 ZNF410Q86VK4 478 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CCDC65Q8IXS2 484 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 GUF1Q8N442 669 aaKnown RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CCDC155Q8N6L0 562 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CAGE1Q8TC20 777 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM174Q8WUU8 243 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 GOLGA1Q92805 767 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 HVCN1Q96D96 273 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CARD6Q9BX69 1037 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 HIPK3Q9H422 1215 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
LRRC28-211ENST00000558890 LZTFL1Q9NQ48 299 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 OGFRQ9NZT2 677 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CAPN11Q9UMQ6 739 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 COL4A3BPQ9Y5P4 624 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
LRRC28-211ENST00000558890 LTBP2Q14767 1821 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 CTAGE9A4FU28 777 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 MYMKA6NI61 221 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 E9PMD0 336 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 ZBTB39O15060 712 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 NBNO60934 754 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 TADA3O75528 432 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 CHRNA1P02708 482 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 SSBP05455 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 KRT18P05783 430 aaKnown RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 CKBP12277 381 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 CSF2RAP15509 400 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 RAG1P15918 1043 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 MARK3P27448 753 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 NAMPTP43490 491 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 CCL23P55773 120 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 SNRPFP62306 86 aaKnown RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 TUBB4BP68371 445 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 MGAT3Q09327 533 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 STK4Q13043 487 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 TFDP1Q14186 410 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 NAA30Q147X3 362 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 EMC2Q15006 297 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 SHHQ15465 462 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms