RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PDGFBP01127 241 aaPredicted RBP15.07■□□□□ 0
VPS18-203ENST00000558855 TRIM67Q6ZTA4 783 aa15.07■□□□□ 0
VPS18-203ENST00000558855 COLGALT2Q8IYK4 626 aa15.07■□□□□ 0
VPS18-203ENST00000558855 RNF168Q8IYW5 571 aaPredicted RBP15.07■□□□□ 0
VPS18-203ENST00000558855 C4orf32Q8N8J7 132 aa15.07■□□□□ 0
VPS18-203ENST00000558855 RABGGTAQ92696 567 aa15.07■□□□□ 0
VPS18-203ENST00000558855 CASP10Q92851 521 aa15.07■□□□□ 0
VPS18-203ENST00000558855 PGBD4Q96DM1 585 aa15.07■□□□□ 0
VPS18-203ENST00000558855 ASIC4Q96FT7 647 aa15.07■□□□□ 0
VPS18-203ENST00000558855 FBXL18Q96ME1 805 aa15.07■□□□□ 0
VPS18-203ENST00000558855 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
VPS18-203ENST00000558855 PRG3Q9Y2Y8 225 aaPredicted RBP15.07■□□□□ 0
VPS18-203ENST00000558855 ARIH1Q9Y4X5 557 aaPredicted RBP15.07■□□□□ 0
VPS18-203ENST00000558855 IRAK3Q9Y616 596 aa15.07■□□□□ 0
VPS18-203ENST00000558855 DOCK8Q8NF50 2099 aa15.06■□□□□ 0
VPS18-203ENST00000558855 TMEM221A6NGB7 291 aa15.06■□□□□ 0
VPS18-203ENST00000558855 ARL5CA6NH57 179 aa15.06■□□□□ 0
VPS18-203ENST00000558855 M0R296 226 aa15.06■□□□□ 0
VPS18-203ENST00000558855 INPPL1O15357 1258 aa15.06■□□□□ 0
VPS18-203ENST00000558855 ASAP2O43150 1006 aa15.06■□□□□ 0
VPS18-203ENST00000558855 DGAT1O75907 488 aa15.06■□□□□ 0
VPS18-203ENST00000558855 ERLIN2O94905 339 aa15.06■□□□□ 0
VPS18-203ENST00000558855 CNPP09543 421 aaKnown RBP15.06■□□□□ 0
VPS18-203ENST00000558855 ITGA4P13612 1032 aa15.06■□□□□ 0
VPS18-203ENST00000558855 AKAP5P24588 427 aa15.06■□□□□ 0
VPS18-203ENST00000558855 DSC1Q08554 894 aa15.06■□□□□ 0
VPS18-203ENST00000558855 IER5LQ5T953 404 aa15.06■□□□□ 0
VPS18-203ENST00000558855 PRSS33Q8NF86 280 aa15.06■□□□□ 0
VPS18-203ENST00000558855 URGCPQ8TCY9 931 aa15.06■□□□□ 0
VPS18-203ENST00000558855 C8orf76Q96K31 380 aa15.06■□□□□ 0
VPS18-203ENST00000558855 B3GALT6Q96L58 329 aa15.06■□□□□ 0
VPS18-203ENST00000558855 CSRNP2Q9H175 543 aa15.06■□□□□ 0
VPS18-203ENST00000558855 ADAM7Q9H2U9 754 aa15.06■□□□□ 0
VPS18-203ENST00000558855 CNTNAP2Q9UHC6 1331 aa15.06■□□□□ 0
VPS18-203ENST00000558855 PDCD11Q14690 1871 aaKnown RBP15.06■□□□□ 0
VPS18-203ENST00000558855 NPTXRO95502 500 aa15.05■□□□□ -0
VPS18-203ENST00000558855 MYBP10242 640 aa15.05■□□□□ -0
VPS18-203ENST00000558855 TOB1P50616 345 aaPredicted RBP15.05■□□□□ -0
VPS18-203ENST00000558855 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
VPS18-203ENST00000558855 TRIM29Q14134 588 aa15.05■□□□□ -0
VPS18-203ENST00000558855 MXD4Q14582 209 aaPredicted RBP15.05■□□□□ -0
VPS18-203ENST00000558855 PTPN21Q16825 1174 aa15.05■□□□□ -0
VPS18-203ENST00000558855 KLHL5Q96PQ7 755 aa15.05■□□□□ -0
VPS18-203ENST00000558855 PHOX2BQ99453 314 aa15.05■□□□□ -0
VPS18-203ENST00000558855 PAAF1Q9BRP4 392 aa15.05■□□□□ -0
VPS18-203ENST00000558855 TSHZ2Q9NRE2 1034 aa15.05■□□□□ -0
VPS18-203ENST00000558855 KLK14Q9P0G3 267 aa15.05■□□□□ -0
VPS18-203ENST00000558855 MYH11P35749 1972 aa15.05■□□□□ -0
VPS18-203ENST00000558855 FSD2A1L4K1 749 aa15.04■□□□□ -0
VPS18-203ENST00000558855 LRRIQ4A6NIV6 560 aa15.04■□□□□ -0
VPS18-203ENST00000558855 C2CD2LO14523 706 aa15.04■□□□□ -0
VPS18-203ENST00000558855 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
VPS18-203ENST00000558855 ASGR2P07307 311 aa15.04■□□□□ -0
VPS18-203ENST00000558855 OR52Z1P0C646 297 aa15.04■□□□□ -0
VPS18-203ENST00000558855 HOXB8P17481 243 aaPredicted RBP15.04■□□□□ -0
VPS18-203ENST00000558855 IGFBP6P24592 240 aaPredicted RBP15.04■□□□□ -0
VPS18-203ENST00000558855 OR1G1P47890 313 aa15.04■□□□□ -0
VPS18-203ENST00000558855 CLCN4P51793 760 aa15.04■□□□□ -0
VPS18-203ENST00000558855 POU5F1BQ06416 359 aa15.04■□□□□ -0
VPS18-203ENST00000558855 TTC38Q5R3I4 469 aa15.04■□□□□ -0
VPS18-203ENST00000558855 EEF1DP3Q658K8 133 aa15.04■□□□□ -0
VPS18-203ENST00000558855 CDCA2Q69YH5 1023 aaPredicted RBP15.04■□□□□ -0
VPS18-203ENST00000558855 NOTUMQ6P988 496 aa15.04■□□□□ -0
VPS18-203ENST00000558855 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
VPS18-203ENST00000558855 EXOC8Q8IYI6 725 aa15.04■□□□□ -0
VPS18-203ENST00000558855 FBXO18Q8NFZ0 1043 aa15.04■□□□□ -0
VPS18-203ENST00000558855 TMEM175Q9BSA9 504 aa15.04■□□□□ -0
VPS18-203ENST00000558855 KIFC3Q9BVG8 833 aa15.04■□□□□ -0
VPS18-203ENST00000558855 HERC2P3Q9BVR0 1158 aa15.04■□□□□ -0
VPS18-203ENST00000558855 NFKBIZQ9BYH8 718 aa15.04■□□□□ -0
VPS18-203ENST00000558855 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
VPS18-203ENST00000558855 FAN1Q9Y2M0 1017 aa15.04■□□□□ -0
VPS18-203ENST00000558855 PP2D1A8MPX8 630 aa15.03■□□□□ -0
VPS18-203ENST00000558855 BRD1O95696 1058 aa15.03■□□□□ -0
VPS18-203ENST00000558855 SRGAP2BP0DMP2 458 aa15.03■□□□□ -0
VPS18-203ENST00000558855 AXLP30530 894 aa15.03■□□□□ -0
VPS18-203ENST00000558855 NHLH1Q02575 133 aa15.03■□□□□ -0
VPS18-203ENST00000558855 TFDP1Q14186 410 aa15.03■□□□□ -0
VPS18-203ENST00000558855 IL17AQ16552 155 aa15.03■□□□□ -0
VPS18-203ENST00000558855 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
VPS18-203ENST00000558855 KIAA1841Q6NSI8 718 aa15.03■□□□□ -0
VPS18-203ENST00000558855 POLR3CQ9BUI4 534 aaPredicted RBP15.03■□□□□ -0
VPS18-203ENST00000558855 GPR62Q9BZJ7 368 aa15.03■□□□□ -0
VPS18-203ENST00000558855 CCDC113Q9H0I3 377 aa15.03■□□□□ -0
VPS18-203ENST00000558855 PDZD7Q9H5P4 517 aa15.03■□□□□ -0
VPS18-203ENST00000558855 DBR1Q9UK59 544 aaKnown RBP15.03■□□□□ -0
VPS18-203ENST00000558855 PCDHB6Q9Y5E3 794 aa15.03■□□□□ -0
VPS18-203ENST00000558855 ZDBF2Q9HCK1 2354 aa15.02■□□□□ -0
VPS18-203ENST00000558855 A0A1B0GUA9 196 aa15.02■□□□□ -0
VPS18-203ENST00000558855 PTGESO14684 152 aa15.02■□□□□ -0
VPS18-203ENST00000558855 N4BP1O75113 896 aaKnown RBP15.02■□□□□ -0
VPS18-203ENST00000558855 SOD2P04179 222 aa15.02■□□□□ -0
VPS18-203ENST00000558855 RPA1P27694 616 aa15.02■□□□□ -0
VPS18-203ENST00000558855 KIAA0319Q5VV43 1072 aa15.02■□□□□ -0
VPS18-203ENST00000558855 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
VPS18-203ENST00000558855 BMP8AQ7Z5Y6 402 aa15.02■□□□□ -0
VPS18-203ENST00000558855 NOSTRINQ8IVI9 506 aa15.02■□□□□ -0
VPS18-203ENST00000558855 RSPH1Q8WYR4 309 aa15.02■□□□□ -0
VPS18-203ENST00000558855 CCDC51Q96ER9 411 aa15.02■□□□□ -0
VPS18-203ENST00000558855 LLPHQ9BRT6 129 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms